Pre_GI: BLASTP Hits

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Query: NC_015410:2258800:2261062 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2261062, End: 2262462, Length: 1401

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016589:2824164:2855328285532828568181491Burkholderia sp. YI23 chromosome 1, complete sequenceouter membrane efflux protein2e-119429
NC_009138:1544835:1570551157055115719691419Herminiimonas arsenicoxydans, complete genomePutative copper resistance-related protein8e-116417
NC_011004:1136895:1156204115620411576551452Rhodopseudomonas palustris TIE-1, complete genomeouter membrane efflux protein1e-77291
NC_015422:2806832:2835999283599928374291431Alicycliphilus denitrificans K601 chromosome, complete genomeouter membrane efflux protein4e-77288
NC_009720:5079048:5088783508878350902101428Xanthobacter autotrophicus Py2, complete genomeouter membrane efflux protein4e-75282
NC_008782:2857899:2887357288735728887871431Acidovorax sp. JS42, complete genomeputative copper resistance-related lipoprotein2e-74279
NC_012792:385670:4004504004504018771428Variovorax paradoxus S110 chromosome 2, complete genomeputative copper resistance-related lipoprotein6e-74278
NC_009620:1531000:1549052154905215505151464Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequencehypothetical protein8e-66251
NC_010322:29983:6347663476647471272Pseudomonas putida GB-1 chromosome, complete genomeouter membrane efflux protein3e-1377
NC_010501:30000:6741067410686811272Pseudomonas putida W619, complete genomeouter membrane efflux protein3e-1377
NC_002947:8394:5071850718519891272Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family3e-1377
NC_009512:27783:6269462694638781185Pseudomonas putida F1, complete genomeouter membrane efflux protein3e-1376.6
NC_017986:2548720:2596893259689325980771185Pseudomonas putida ND6 chromosome, complete genomeouter membrane efflux protein7e-1375.9
NC_014323:5051041:5070673507067350719591287Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system outer membrane protein3e-1273.6
NC_011146:2200142:2240273224027322415711299Geobacter bemidjiensis Bem, complete genomeouter membrane efflux protein9e-1272
NC_015740:1291739:1303598130359813048391242Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecobalt-zinc-cadmium resistance protein CzcC3e-1067
NC_009434:3611738:3697189369718936984301242Pseudomonas stutzeri A1501, complete genomecobalt-zinc-cadmium resistance protein CzcC, putative4e-1066.2
NC_010170:4800000:4868326486832648696151290Bordetella petrii, complete genomemetal ion efflux outer membrane protein, putative8e-0962
NC_002939:2315402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative8e-0858.9
NC_002939:2337402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative8e-0858.9
NC_008782:1917634:1928110192811019294651356Acidovorax sp. JS42, complete genomeouter membrane efflux protein1e-0758.5
NC_012968:1594954:1626466162646616277311266Methylotenera mobilis JLW8, complete genomeouter membrane efflux protein3e-0757
NC_010002:1879220:1906105190610519074361332Delftia acidovorans SPH-1, complete genomeouter membrane efflux protein5e-0756.2
NC_002977:2254440:2269135226913522704481314Methylococcus capsulatus str. Bath, complete genomeouter membrane efflux protein8e-0652.4
NC_009439:1297851:1323417132341713246671251Pseudomonas mendocina ymp, complete genomeouter membrane efflux protein8e-0652