Pre_GI: BLASTP Hits

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Query: NC_015224:2061951:2065288 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 2065288, End: 2065869, Length: 582

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2127918:213056121305612131229669Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,TetR family transcriptional regulator9e-108389
NC_016816:2953530:298857429885742989209636Pantoea ananatis LMG 5342, complete genomeHTH-type transcriptional regulator RutR8e-74276
NC_020063:2785652:279097727909772791615639Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator2e-68258
NC_012125:2646792:266813126681312668769639Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-67254
NC_010102:1979742:200090520009052001543639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-67254
NC_011740:1189455:119515711951571195795639Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway1e-66252
NC_006511:1770000:179117817911781791816639Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator9e-67252
NC_007384:1086025:111171911117191112357639Shigella sonnei Ss046, complete genomeputative tet operon regulator9e-67252
NC_011147:1763681:178636117863611786999639Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator9e-67252
NC_009436:1679265:169231516923151692953639Enterobacter sp. 638, complete genomeTetR family transcriptional regulator1e-65249
NC_015556:819503:819503819503820162660Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, TetR family2e-35148
NC_015376:2241000:224550722455072246205699Burkholderia gladioli BSR3 chromosome chromosome 2, completeTetR family transcriptional regulator1e-33142
NC_013209:2337204:236647023664702367123654Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR5e-31134
NC_017100:2339826:236909223690922369745654Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator TetR5e-31134
NC_017108:2337163:236642923664292367082654Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator TetR5e-31134
NC_017111:2337181:236644723664472367100654Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator TetR5e-31134
NC_017121:2337168:236643423664342367087654Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator TetR5e-31134
NC_017125:2339806:236907223690722369725654Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator TetR5e-31134
NC_017146:2339848:236911423691142369767654Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator TetR5e-31134
NC_017150:2244950:227421622742162274869654Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator TetR5e-31134
NC_015563:4383000:440362344036234404303681Delftia sp. Cs1-4 chromosome, complete genomeTetracycline transcriptional regulator YcdC domain-containing protein1e-30132
NC_008228:4696338:470983347098334710468636Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, TetR family2e-1272.4
NC_010552:2331486:234899723489972349671675Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, TetR family2e-0962.4
NC_013385:1007616:100995610099561010600645Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family2e-0962
NC_010515:2037825:203968620396862040360675Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family5e-0960.8
NC_000916:952663:968930968930969556627Methanothermobacter thermautotrophicus str. Delta H, completetranscriptional regulator related protein4e-0754.7
NC_013929:7117326:711959371195937120255663Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator9e-0753.5
NC_002939:173833:191349191349191960612Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family9e-0753.5
NC_011000:1262324:129188312918831292545663Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein8e-0753.5
NC_016002:2453919:247043024704302471047618Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator1e-0652.8
NC_007644:2452244:245224424522442452852609Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, TetR family2e-0652
NC_014408:1314382:133323313332331333886654Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator4e-0651.2
NC_007517:2494000:250784425078442508413570Geobacter metallireducens GS-15, complete genometranscriptional regulator, TetR family5e-0650.8
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family5e-0650.8
NC_014837:2758239:275953327595332760171639Pantoea sp. At-9b chromosome, complete genomeTetR family transcriptional regulator6e-0650.8
NC_015172:2986867:302742730274273028068642Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family6e-0650.4