Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:7117326 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
71173267118183858hypothetical proteinBLASTP
711826071194681209hypothetical proteinBLASTP
71195937120255663transcriptional regulatorQuickGO ontologyBLASTP
712035671219811626efflux transporterQuickGO ontologyBLASTP
71222637122574312hypothetical protein
71226837123462780ion ABC transporterQuickGO ontologyBLASTP
712353471262812748hypothetical proteinBLASTP
71266787127133456hypothetical proteinBLASTP
71272317127710480reductaseQuickGO ontologyBLASTP
71278247128399576stress proteinQuickGO ontologyBLASTP
71285917129166576stress proteinQuickGO ontologyBLASTP
712929271304371146hypothetical proteinBLASTP
71305477131287741hypothetical proteinBLASTP
71313007132124825stress proteinQuickGO ontologyBLASTP
713231571334811167ATPGTP-binding proteinQuickGO ontologyBLASTP
713350271359972496hypothetical proteinBLASTP
71359977136815819hypothetical proteinBLASTP
71368347137562729hypothetical proteinBLASTP
713830271405452244penicillin-binding proteinQuickGO ontologyBLASTP