Pre_GI: BLASTP Hits

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Query: NC_014323:3976351:4010559 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4010559, End: 4011662, Length: 1104

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007511:3103999:3106068310606831071681101Burkholderia sp. 383 chromosome 2, complete sequenceThiJ/PfpI family protein1e-62240
NC_002928:1351750:1372514137251413737071194Bordetella parapertussis 12822, complete genomeprobable transcriptional regulator3e-62239
NC_005823:2840000:2849874284987428510551182Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130putative transcriptional regulator2e-57223
NC_010602:2911823:2914499291449929156261128Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein3e-57222
NC_010842:2919108:2922870292287029240121143Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeTranscriptional regulator3e-57222
NC_013595:3388000:340955034095503410461912Streptosporangium roseum DSM 43021, complete genometranscription regulator3e-1170.1
NC_014166:2149984:215413621541362154717582Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-1170.1
NC_009925:1003000:101366710136671014251585Acaryochloris marina MBIC11017, complete genomeDJ-1/PfpI family protein5e-1169.3
NC_010084:695817:700555700555701523969Burkholderia multivorans ATCC 17616 chromosome 1, completeAraC family transcriptional regulator5e-1168.9
NC_010804:2808676:282325028232502824218969Burkholderia multivorans ATCC 17616 chromosome 1, completeAraC subfamily transcriptional regulator5e-1168.9
NC_011000:1023800:1030077103007710310931017Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein6e-1168.9
NC_015580:1745918:175400517540051754982978Novosphingobium sp. PP1Y, complete genomeAraC family transcriptional regulator7e-1168.6
NC_015859:2726414:274168027416802742522843Corynebacterium variabile DSM 44702 chromosome, complete genomeThiJ/PfpI domain-containing protein7e-1168.6
NC_014550:3377834:339449033944903395332843Arthrobacter arilaitensis Re117, complete genomeputative AraC family transcriptional regulator7e-1168.6
NC_009256:3056000:306798030679803068948969Burkholderia vietnamiensis G4 chromosome 1, complete sequencetranscriptional regulator1e-1067.8
NC_012997:2941627:2955731295573129567531023Teredinibacter turnerae T7901, complete genometranscriptional regulator, AraC family1e-1067.8
NC_018524:4988810:500611750061175007007891Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein8e-1065.1
NC_015663:1356982:138623613862361387189954Enterobacter aerogenes KCTC 2190 chromosome, complete genomeAraC family transcriptional regulator1e-0964.3
NC_014323:3976351:4011751401175140127581008Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein1e-0964.3
NC_018750:3481476:3502680350268035037321053Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, AraC family1e-0964.3
NC_010718:2265447:229220322922032292811609Natranaerobius thermophilus JW/NM-WN-LF, complete genomeThiJ/PfpI domain protein2e-0963.9
NC_008543:2220698:225640822564082257346939Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-0963.2
NC_008061:190287:222318222318223256939Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-0963.2
NC_010515:2111691:214664121466412147621981Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-0963.2
NC_019904:1616742:163662016366201637615996Echinicola vietnamensis DSM 17526 chromosome, complete genometranscriptional regulator5e-0962.4
NC_015733:2963548:296354829635482964501954Pseudomonas putida S16 chromosome, complete genometranscriptional regulator7e-0962
NC_010515:2111691:214134321413432142293951Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, AraC family8e-0961.6
NC_008061:190287:217020217020217970951Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family8e-0961.6
NC_016745:2280375:228821122882112288795585Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein1e-0861.2
NC_010688:673454:700564700564701337774Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-0861.2
NC_010725:750911:774638774638775594957Methylobacterium populi BJ001, complete genometranscriptional regulator, AraC family1e-0861.2
NC_004369:531579:558983558983559948966Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-0860.8
NC_007492:2035761:205437120543712055354984Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family1e-0860.8
NC_007511:3103999:3107257310725731082731017Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0860.5
NC_019673:1275627:130462313046231305609987Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, AraC family2e-0860.5
NC_017271:4193000:419482241948224195595774Xanthomonas campestris pv. raphani 756C chromosome, completeThiJ-PfpI family protein3e-0860.1
NC_013037:5442131:5442852544285254438711020Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family3e-0859.7
NC_003902:4252000:425336342533634253956594Xanthomonas campestris pv. campestris str. ATCC 33913, completeThiJ/PfpI family protein3e-0859.7
NC_015563:4773415:4789612478961247906491038Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator6e-0858.9
NC_013956:1762171:177798017779801778675696Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein6e-0858.9
NC_016113:803268:8071748071748083401167Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator6e-0858.9
NC_015376:3320818:334116233411623342130969Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, AraC family1e-0757.8
NC_017904:2724941:275248027524802753430951Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-0757.4
NC_008268:361424:369410369410370369960Rhodococcus sp. RHA1, complete genometranscriptional regulator, AraC family2e-0757
NC_016945:370471:406223406223406801579Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-0756.6
NC_012583:361241:417672417672418268597Vibrio cholerae O395 chromosome chromosome II, complete sequenceThiJ/PfpI3e-0756.6
NC_009456:787322:845674845674846270597Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-0756.6
NC_002506:370629:406385406385406981597Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-0756.6
NC_014151:2312000:233071923307192331318600Cellulomonas flavigena DSM 20109 chromosome, complete genomeThiJ/PfpI domain protein4e-0756.2
NC_015953:4908069:493169249316924932666975Streptomyces sp. SirexAA-E chromosome, complete genomeAraC family transcriptional regulator4e-0756.2
NC_016830:952342:9813109813109823381029Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator4e-0756.2
NC_007492:2035761:205359520535952054281687Pseudomonas fluorescens PfO-1, complete genomeThiJ/PfpI4e-0756.2
NC_006582:3827844:383926738392673839881615Bacillus clausii KSM-K16, complete genometranscriptional regulator, AraC/XylS family3e-0756.2
NC_017047:1934430:1949107194910719501201014Rahnella aquatilis HX2 chromosome, complete genometranscriptional activator FtrA5e-0755.8
NC_016818:1963875:1976077197607719770901014Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain4e-0755.8
NC_010162:8873051:8885884888588488869001017Sorangium cellulosum 'So ce 56', complete genomeAraC family transcriptional regulator4e-0755.8
NC_008596:3404832:3437657343765734386701014Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, AraC family protein5e-0755.5
NC_007952:1587500:159049115904911591489999Burkholderia xenovorans LB400 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-0755.5
NC_017904:2724941:275344927534492754192744Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein6e-0755.5
NC_011000:1023800:102931910293191030002684Burkholderia cenocepacia J2315 chromosome 1, complete sequenceDJ-1/PfpI family protein6e-0755.5
NC_009832:4564752:458611045861104586943834Serratia proteamaculans 568, complete genomeThiJ/PfpI domain protein7e-0755.5
NC_011894:2385834:238993223899322390918987Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family7e-0755.5
NC_013446:2130021:2143868214386821450521185Comamonas testosteroni CNB-2, complete genomeSulfate permease andrelated transporter7e-0755.1
NC_019673:8114376:811678281167828117732951Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, AdpA family8e-0755.1
NC_004578:3193490:319845031984503199280831Pseudomonas syringae pv. tomato str. DC3000, complete genomeThiJ/PfpI family protein1e-0654.7
NC_008782:1277117:129423112942311295220990Acidovorax sp. JS42, complete genometranscriptional regulator, AraC family1e-0654.3
NC_015379:4426827:442849844284984429433936Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family1e-0654.3
NC_012880:2480000:249500024950002495701702Dickeya dadantii Ech703, complete genomeThiJ/PfpI domain protein1e-0654.3
NC_010501:2609567:2645966264596626470211056Pseudomonas putida W619, complete genometranscriptional regulator, AraC family2e-0653.9
NC_007645:829500:8408168408168418501035Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain2e-0653.5
NC_004463:8401060:842551484255148426488975Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein2e-0653.5
NC_008740:3259962:326856632685663269267702Marinobacter aquaeolei VT8, complete genomeThiJ/PfpI domain protein2e-0653.5
NC_016845:2655512:266488626648862665866981Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative helix-turn-helix AraC-type transcriptional regulator3e-0653.1
NC_009648:1882500:188928618892861890266981Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative helix-turn-helix, AraC type3e-0653.1
NC_008596:3404832:343870934387093439404696Mycobacterium smegmatis str. MC2 155, complete genomeisonitrile hydratase, putative4e-0652.8
NC_016626:1825845:185472818547281855714987Burkholderia sp. YI23 plasmid byi_1p, complete sequenceAraC family transcriptional regulator4e-0652.8
NC_014500:3744705:3746639374663937476791041Dickeya dadantii 3937 chromosome, complete genomeAraC family transcriptional regulator4e-0652.8
NC_012988:1777618:1803166180316618041881023Methylobacterium extorquens DM4, complete genomeAraC family transcriptional regulator5e-0652.4
NC_011757:1532047:153808115380811539046966Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family5e-0652.4
NC_017249:5255967:527970452797045280351648Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-0652.4
NC_020064:1409596:143850214385021439464963Serratia marcescens FGI94, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain6e-0652
NC_011386:2762886:276951627695162770220705Oligotropha carboxidovorans OM5, complete genomeputative isonitrile hydratase8e-0651.6
NC_015684:1343251:135420913542091354913705Oligotropha carboxidovorans OM5 chromosome, complete genomeThiJ/PfpI domain-containing protein8e-0651.6
NC_015733:2581324:260258326025832603554972Pseudomonas putida S16 chromosome, complete genomehypothetical protein8e-0651.6
NC_004129:5846415:584641558464155847413999Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family1e-0551.6