Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:952342 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9523429616089267adhesinhemagglutinin HecA familyQuickGO ontologyBLASTP
961593962144552hypothetical proteinBLASTP
9626919642861596transposaseQuickGO ontologyBLASTP
964321964656336ISPpu14 transposase Orf2QuickGO ontologyBLASTP
964653964985333transposase is3 is911 family proteinQuickGO ontologyBLASTP
9650709660711002transmembrane proteinQuickGO ontologyBLASTP
966537967007471hypothetical protein
968253969110858transmembrane proteinQuickGO ontologyBLASTP
969144969794651transmembrane proteinQuickGO ontologyBLASTP
9710969724571362hypothetical proteinBLASTP
972641972901261hypothetical proteinBLASTP
9734999747491251transposaseQuickGO ontologyBLASTP
9750029764831482leucine-rich repeat proteinQuickGO ontologyBLASTP
976583977416834dehydrogenaseQuickGO ontologyBLASTP
977465978373909araC family transcriptional regulatorQuickGO ontologyBLASTP
9786129803031692protein LeuA1QuickGO ontologyBLASTP
980443980748306virulence-associated proteinQuickGO ontologyBLASTP
980757981017261protein HigBQuickGO ontologyBLASTP
9813109823381029araC family transcriptional regulatorQuickGO ontologyBLASTP
982497983366870putative solute-binding component of ABC transporterQuickGO ontologyBLASTP