Pre_GI: BLASTP Hits

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Query: NC_013716:4885776:4892360 Citrobacter rodentium ICC168, complete genome

Start: 4892360, End: 4893793, Length: 1434

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015968:4117835:4161425416142541628581434Enterobacter asburiae LF7a chromosome, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase0904
NC_012880:3915500:3929553392955339309921440Dickeya dadantii Ech703, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase0763
NC_009053:1081651:1085816108581610872581443Actinobacillus pleuropneumoniae L20, complete genomepenicillin-binding protein 4 precursor3e-118425
NC_010278:1045884:1050049105004910514911443Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,D-alanyl-D-alanine carboxypeptidase6e-118424
NC_013416:939668:9396689396689411101443Aggregatibacter actinomycetemcomitans D11S-1, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase5e-112405
NC_015713:2453409:2462431246243124638401410Simkania negevensis Z chromosome gsn.131, complete genomeD-alanyl-D-alanine carboxypeptidase dacC6e-46185
NC_009614:1461628:1475275147527514766751401Bacteroides vulgatus ATCC 8482 chromosome, complete genomeexported D-alanyl-D-alanine carboxypeptidase penicillin-binding protein1e-41171
NC_012968:435532:4589044589044603371434Methylotenera mobilis JLW8, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase1e-33144
NC_014935:1955226:1983525198352519849251401Nitratifractor saLSUginis DSM 16511 chromosome, complete genomed-alanyl-d-alaninecarboxypeptidase/ d-alanyl-d-alanine-endopeptidase3e-32140
NC_020209:397376:3973763973763988301455Pseudomonas poae RE*1-1-14, complete genomeputative penicillin-binding exported protein9e-32138
NC_014933:979063:9825199825199839491431Bacteroides helcogenes P 36-108 chromosome, complete genomeD-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- alanine-endopeptidase7e-27122
NC_004578:2560473:2563001256300125644671467Pseudomonas syringae pv. tomato str. DC3000, complete genomeD-alanyl-D-alanine carboxypeptidase6e-26119
NC_017515:1855114:1855114185511418565231410Neisseria meningitidis M04-240196 chromosome, complete genomeserine-type D-Ala-D-Ala carboxypeptidase9e-26118
NC_018524:2423016:2423016242301624246231608Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase3e-25117
NC_017501:1863417:1866030186603018674391410Neisseria meningitidis 8013, complete genomeD-alanyl-D-alanine carboxypeptidase (DD-peptidase; DD-carboxypeptidase)3e-25117
NC_017517:1807072:1851638185163818530471410Neisseria meningitidis M01-240355 chromosome, complete genomeserine-type D-Ala-D-Ala carboxypeptidase4e-25116
NC_014210:5370868:5371880537188053735171638Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- alanine-endopeptidase2e-24114
NC_010322:1817598:1820058182005818215151458Pseudomonas putida GB-1 chromosome, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase1e-23111
NC_014910:4316706:4336629433662943381011473Alicycliphilus denitrificans BC chromosome, complete genomed-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase1e-23111
NC_007614:2675302:2692495269249526941411647Nitrosospira multiformis ATCC 25196 chromosome 1, completeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase8e-23108
NC_014033:2410331:2410331241033124115601230Prevotella ruminicola 23 chromosome, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase5e-1686.3
NC_016751:2044379:2047602204760220486721071Marinitoga piezophila KA3 chromosome, complete genomeD-alanyl-D-alanine carboxypeptidase1e-1584.7
NC_013739:5535945:5539027553902755405801554Conexibacter woesei DSM 14684, complete genomeD-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- alanine-endopeptidase5e-1582.8
NC_014532:3479674:3500521350052135019841464Halomonas elongata DSM 2581, complete genomeD-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- ala nine-endopeptidase7e-1582.4
NC_014041:4093190:4106697410669741080071311Zunongwangia profunda SM-A87 chromosome, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase1e-1378.6
NC_016789:2084805:2084805208480520860851281Corynebacterium diphtheriae PW8 chromosome, complete genomeD-Ala D-Ala carboxypeptidase2e-1274.3
NC_006085:308567:3103153103153117451431Propionibacterium acnes KPA171202, complete genomeputative carboxypeptidase5e-1272.8
NC_016512:305240:3094133094133107861374Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase1e-1171.6
NC_016511:308244:3100493100493114221374Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase1e-1171.6
NC_016516:300846:3008463008463022191374Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase1e-1171.6
NC_014039:334892:3366973366973380701374Propionibacterium acnes SK137 chromosome, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase1e-1171.6
NC_012526:2317862:2336082233608223375421461Deinococcus deserti VCD115, complete genomeputative D-Ala-D-Ala carboxypeptidase2e-1170.9
NC_014151:657382:6688806688806702921413Cellulomonas flavigena DSM 20109 chromosome, complete genomeD-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase2e-1067.4
NC_015144:1333179:1333179133317913344141236Weeksella virosa DSM 16922 chromosome, complete genomepeptidase S13 D-Ala-D-Ala carboxypeptidase C1e-0965.1
NC_007516:1283210:1281906128190612832131308Synechococcus sp. CC9605, complete genomeD-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase4e-0963.5
NC_013757:2630000:2642880264288026444961617Geodermatophilus obscurus DSM 43160, complete genomepeptidase S13 D-Ala-D-Ala carboxypeptidase C2e-0653.9