Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:2476334:2477443 Citrobacter rodentium ICC168, complete genome

Start: 2477443, End: 2479728, Length: 2286

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009655:1626466:1626466162646616287362271Actinobacillus succinogenes 130Z chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha01267
NC_009901:2485965:2498658249865825009462289Shewanella pealeana ATCC 700345, complete genomeribonucleoside-diphosphate reductase, alpha subunit01266
NC_020075:590481:5904815904815927632283Candidatus Blochmannia chromaiodes str. 640, complete genomeRibonucleoside-diphosphate reductase 1 subunit alpha01232
NC_014909:540000:5403145403145426052292Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit01219
NC_005061:524704:5286245286245309092286Candidatus Blochmannia floridanus, complete genomeribonucleotide-diphosphate reductase alpha subunit01201
NC_000918:35564:5796157961603662406Aquifex aeolicus VF5, complete genomeribonucleotide reductase alpha chain2e-92340
NC_017161:1:2406224062264402379Hydrogenobacter thermophilus TK-6 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha7e-88325
NC_013799:1:2407624076263792304Hydrogenobacter thermophilus TK-6, complete genomeribonucleotide reductase alpha subunit6e-88325
NC_012225:445500:4457264457264480472322Brachyspira hyodysenteriae WA1, complete genomeribonucleotide-diphosphate reductase alpha subunit1e-84315
NC_014150:3053859:3069321306932130716362316Brachyspira murdochii DSM 12563 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit2e-82307
NC_009850:11076:2669526695290792385Arcobacter butzleri RM4018, complete genomeribonucleoside-diphosphate reductase, alpha chain4e-82306
NC_017279:29737:2973729737321062370Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeribonucleoside-diphosphate reductase subunit alpha5e-82306
NC_002163:29726:2972629726320952370Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeribonucleotide-diphosphate reductase alpha subunit7e-82305
NC_014802:27857:2785727857302262370Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeribonucleoside-diphosphate reductase, alpha subunit3e-81303
NC_017187:10320:2611926119285032385Arcobacter butzleri ED-1, complete genomeribonucleotide-diphosphate reductase subunit alpha7e-81302
NC_016077:2044876:2063810206381020660922283Acidaminococcus intestini RyC-MR95 chromosome, complete genomeribonucleoside-diphosphate reductase2e-77290
NC_015690:7518732:7539034753903475412592226Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNrdA5e-76286
NC_015947:223184:2273352273352297372403Burkholderia sp. JV3 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha7e-69262
NC_011770:4591500:4594660459466045975512892Pseudomonas aeruginosa LESB58, complete genomeNrdA, catalytic component of class Ia ribonucleotide reductase1e-67258
NC_002516:1236644:1251418125141812543092892Pseudomonas aeruginosa PAO1, complete genomeribonucleotide-diphosphate reductase alpha subunit1e-67258
NC_008463:4389721:4394703439470343975942892Pseudomonas aeruginosa UCBPP-PA14, complete genomeribonucleoside reductase, large chain1e-67258
NC_018080:4280401:4285383428538342882742892Pseudomonas aeruginosa DK2 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-67258
NC_013889:1514799:1532533153253315354272895Thioalkalivibrio sp. K90mix chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit1e-67258
NC_009439:3485000:3489275348927534921812907Pseudomonas mendocina ymp, complete genomeribonucleotide-diphosphate reductase subunit alpha5e-66253
NC_011901:2739984:2755661275566127585762916Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeribonucleotide-diphosphate reductase subunit alpha6e-66252
NC_015556:1899850:1910179191017919130882910Pseudomonas fulva 12-X chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit5e-65249
NC_005085:2457295:2471817247181724747352919Chromobacterium violaceum ATCC 12472, complete genomeribonucleotide-diphosphate reductase alpha subunit2e-64248
NC_019902:2372097:2389946238994623928582913Thioalkalivibrio nitratireducens DSM 14787, complete genomeRibonucleotide reductase of class Ia (aerobic), alpha subunit2e-64248
NC_019940:1309359:1311579131157913145062928Thioflavicoccus mobilis 8321 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha3e-64247
NC_015410:3791500:3795351379535137982572907Pseudomonas mendocina NK-01 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha2e-64247
NC_013037:3994083:4005818400581840082622445Dyadobacter fermentans DSM 18053, complete genomeribonucleoside-diphosphate reductase, alpha subunit4e-64246
NC_006177:324363:3592773592773616252349Symbiobacterium thermophilum IAM 14863, complete genomeribonucleoside-diphosphate reductase alpha subunit7e-64245
NC_016002:1975000:2018411201841120212602850Pseudogulbenkiania sp. NH8B, complete genomeribonucleoside-diphosphate reductase subunit alpha1e-63245
NC_014831:2397563:2411645241164524142122568Thermaerobacter marianensis DSM 12885 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit7e-63242
NC_015740:1594376:1606131160613116090132883Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeribonucleotide-diphosphate reductase subunit alpha3e-62240
NC_007925:3911323:3911323391132339142052883Rhodopseudomonas palustris BisB18, complete genomeRibonucleoside-diphosphate reductase4e-62240
NC_015726:3280000:3300802330080233037352934Cupriavidus necator N-1 chromosome 1, complete sequenceribonucleoside-diphosphate reductase subunit alpha8e-62239
NC_009434:1743696:1754335175433517572202886Pseudomonas stutzeri A1501, complete genomeribonucleotide-diphosphate reductase subunit alpha2e-61238
NC_015711:8169752:8177814817781481803302517Myxococcus fulvus HW-1 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha1e-59231
NC_014829:4511738:4521385452138545235652181Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit1e-59231
NC_005773:4282840:4285909428590942888212913Pseudomonas syringae pv. phaseolicola 1448A, complete genomeribonucleoside-diphosphate reductase, alpha subunit2e-59231
NC_007347:3204637:3223794322379432267332940Ralstonia eutropha JMP134 chromosome 1, complete sequenceribonucleotide-diphosphate reductase alpha subunit4e-59229
NC_017506:3825148:3842051384205138448162766Marinobacter adhaerens HP15 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-58228
NC_016776:3181706:3195374319537431978932520Bacteroides fragilis 638R, complete genomeputative ribonucleoside-diphosphate reductase alpha chain1e-58228
NC_019892:1113114:1115575111557511179802406Singulisphaera acidiphila DSM 18658 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha1e-58228
NC_003228:3143470:3157880315788031603992520Bacteroides fragilis NCTC 9343, complete genomeribonucleotide-diphosphate reductase alpha subunit1e-58228
NC_006347:3082921:3096589309658930991082520Bacteroides fragilis YCH46, complete genomeribonucleotide-diphosphate reductase alpha subunit1e-58228
NC_010645:3239420:3243201324320132461132913Bordetella avium 197N, complete genomeribonucleotide-diphosphate reductase subunit alpha2e-58227
NC_008095:6323456:6331039633103963333962358Myxococcus xanthus DK 1622, complete genomeribonucleoside-diphosphate reductase, alpha subunit3e-58227
NC_013959:2666321:2673102267310226759422841Sideroxydans lithotrophicus ES-1 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit3e-58227
NC_007404:2048000:2066037206603720689612925Thiobacillus denitrificans ATCC 25259, complete genomeribonucleotide-diphosphate reductase alpha subunit5e-58226
NC_018644:446102:4549164549164576542739Alpha proteobacterium HIMB59 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit3e-57223
NC_013406:781308:7842537842537865862334Paenibacillus sp. Y412MC10 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-56222
NC_011761:2344408:2344408234440823472542847Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeribonucleotide-diphosphate reductase subunit alpha6e-56219
NC_011206:2239109:2239109223910922419552847Acidithiobacillus ferrooxidans ATCC 53993, complete genomeribonucleoside-diphosphate reductase, alpha subunit6e-56219
NC_015942:2544407:2548214254821425510662853Acidithiobacillus ferrivorans SS3 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha7e-56219
NC_015953:4908069:4933985493398549363962412Streptomyces sp. SirexAA-E chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha1e-53211
NC_012669:96966:1027051027051048102106Beutenbergia cavernae DSM 12333, complete genomeribonucleoside-diphosphate reductase, alpha subunit1e-42175
NC_011134:533679:5493815493815515552175Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeribonucleotide reductase of class Ib (aerobic) alpha subunit NrdE1e-42175
NC_012470:1635516:1641455164145516436292175Streptococcus equi subsp. zooepidemicus, complete genomeribonucleoside-diphosphate reductase alpha subunit4e-42173
NC_010545:1729161:1729161172916117313202160Corynebacterium urealyticum DSM 7109, complete genomeribonucleoside-diphosphate reductase alpha chain2e-41171
NC_018012:3401854:3407543340754334115924050Thiocystis violascens DSM 198 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha1e-40169
NC_016932:1791868:1802510180251018046692160Corynebacterium pseudotuberculosis 316 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha2e-40167
NC_011886:2369980:2380276238027623824142139Arthrobacter chlorophenolicus A6, complete genomeribonucleoside-diphosphate reductase, alpha subunit2e-40167
NC_015183:51500:7189971899740882190Agrobacterium sp. H13-3 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-39165
NC_015671:3211972:3221398322139832235452148Cellvibrio gilvus ATCC 13127 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha2e-38161
NC_014151:449732:4770514770514792102160Cellulomonas flavigena DSM 20109 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit4e-38160
NC_012803:1117875:1129861112986111320382178Micrococcus luteus NCTC 2665, complete genomeribonucleoside-diphosphate reductase class Ib alpha subunit3e-38160
NC_015588:2468207:2481339248133924834952157Isoptericola variabilis 225 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit5e-38159
NC_016642:2440070:2465436246543624675862151Pseudovibrio sp. FO-BEG1 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha7e-38159
NC_003062:50756:7137371373735592187Agrobacterium tumefaciens str. C58 chromosome circular, completeribonucleotide-diphosphate reductase alpha subunit1e-37159
NC_003304:51048:7167971679737602082Agrobacterium tumefaciens str. C58 chromosome circular, completeribonucleotide-diphosphate reductase alpha subunit1e-37159
NC_009381:1783886:1815976181597618181262151Yersinia pestis Pestoides F chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha2e-37158
NC_008025:1889891:1889891188989118918401950Deinococcus geothermalis DSM 11300, complete genomeRibonucleoside-diphosphate reductase, alpha subunit7e-37155
NC_014246:676570:7018877018877040312145Mobiluncus curtisii ATCC 43063 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha9e-36152
NC_014550:2013422:2024685202468520268232139Arthrobacter arilaitensis Re117, complete genomeribonucleoside-diphosphate reductase subunit alpha2e-35151
NC_014550:3316115:3359711335971133618762166Arthrobacter arilaitensis Re117, complete genomeribonucleoside-diphosphate reductase subunit alpha1e-34149
NC_015514:3911655:3920923392092339230702148Cellulomonas fimi ATCC 484 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha2e-34148
NC_014448:803106:8189518189518211162166Mycoplasma hyorhinis HUB-1 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha7e-34146
NC_016893:694587:7163317163317184452115Wigglesworthia glossinidia endosymbiont of Glossina morsitansribonucleoside-diphosphate reductase 2 subunit alpha7e-34146
NC_010694:1052722:1052722105272210548032082Erwinia tasmaniensis, complete genomeRibonucleoside-diphosphate reductase 2, alpha subunit2e-33144
NC_015975:1593797:1595433159543315975862154Lactobacillus ruminis ATCC 27782 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha6e-32139
AC_000091:2747520:2800004280000428021482145Escherichia coli W3110 DNA, complete genomeribonucleoside-diphosphate reductase 2, alpha subunit6e-31136
NC_000913:2746886:2799370279937028015142145Escherichia coli K12, complete genomeribonucleotide-diphosphate reductase alpha subunit6e-31136
NC_012759:2633949:2685182268518226873262145Escherichia coli BW2952 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha6e-31136
NC_013364:3339768:3364961336496133671052145Escherichia coli O111:H- str. 11128, complete genomeribonucleoside-diphosphate reductase 2 subunit alpha5e-31136
NC_016641:3711972:3711972371197237140562085Paenibacillus terrae HPL-003 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-29132
NC_004344:672550:6948436948436969572115Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,ribonucleotide-diphosphate reductase alpha subunit3e-28127
NC_011420:3582500:3586930358693035887951866Rhodospirillum centenum SW, complete genomeribonucleoside-diphosphate reductase, alpha subunit4e-27123
NC_004432:80780:1000511000511022282178Mycoplasma penetrans HF-2, complete genomeribonucleotide-diphosphate reductase alpha subunit2e-26121
NC_007794:262402:2910832910832930862004Novosphingobium aromaticivorans DSM 12444, complete genomeRibonucleoside-diphosphate reductase9e-26119
NC_010547:98330:1171341171341196592526Cyanothece sp. ATCC 51142 chromosome linear, complete sequence1e-24115
NC_015177:1476073:1479494147949414811401647Pedobacter saltans DSM 12145 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha chain1e-24115
NC_011529:1685834:1689494168949416922262733Thermococcus onnurineus NA1, complete genomeHypothetical ribonucleotide reductase alpha subunit2e-22108
NC_012622:1194347:1197776119777612002922517Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeribonucleoside-diphosphate reductase3e-21103
NC_006833:902744:9038129038129055961785Wolbachia endosymbiont strain TRS of Brugia malayi, completeribonucleotide-diphosphate reductase alpha subunit9e-2099.4
NC_010814:2482848:2484505248450524867422238Geobacter lovleyi SZ, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent9e-1996.3
NC_012918:3558500:3562426356242635646602235Geobacter sp. M21 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha2e-1895.1
NC_016051:1849905:1859341185934118634264086Thermococcus sp. AM4 chromosome, complete genomeribonucleoside-diphosphate reductase, coenzyme B12-dependent7e-1893.2
NC_019970:336472:3364723364723387812310Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribonucleoside-diphosphate reductase class II8e-1892.8
NC_014973:1257625:1273561127356112757982238Geobacter sp. M18 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent1e-1792
NC_020195:285606:2972502972502989651716Blattabacterium sp. (Blatta orientalis) str. Tarazona, completeribonucleoside-diphosphate reductase alpha chain4e-1790.5
NC_007880:935670:9553589553589571301773Francisella tularensis subsp. holarctica, complete genomeRibonucleoside-diphosphate reductase, alpha subunit1e-1689
NC_016627:3815690:3819078381907838213752298Clostridium clariflavum DSM 19732 chromosome, complete genomeribonucleoside-diphosphate reductase class II2e-1688.2
NC_010003:2056000:2066974206697420694962523Petrotoga mobilis SJ95, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent2e-1585.1
NC_007494:621673:6364496364496387162268Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceRibonucleotide reductase2e-1585.1
NC_016629:1175828:1197437119743711996712235Desulfovibrio africanus str. Walvis Bay chromosome, completeribonucleoside-diphosphate reductase6e-1583.6
NC_018664:2459994:2461358246135824636582301Clostridium acidurici 9a chromosome, complete genomeribonucleoside-diphosphate reductase NrdZ1e-1482
NC_008752:725189:7251897251897288693681Acidovorax avenae subsp. citrulli AAC00-1, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent9e-1479.3
NC_007356:202131:2217962217962235531758Dehalococcoides sp. CBDB1, complete genomeribonucleotide reductase2e-1378.2
NC_014804:1898419:1917408191740819205363129Thermococcus barophilus MP chromosome, complete genomeribonucleotide reductase of class II, coenzyme B12-dependent5e-1377
NC_007298:1029841:1044633104463310475272895Dechloromonas aromatica RCB, complete genomeRibonucleotide reductase large subunit1e-1275.9
NC_000868:1562000:1570457157045715768256369Pyrococcus abyssi GE5, complete genomeribonucleotide-diphosphate reductase alpha subunit2e-1275.5
NC_002977:2719774:2719774271977427237273954Methylococcus capsulatus str. Bath, complete genomeribonucleoside reductase precursor4e-1170.5
NC_017191:1173989:130377213037721304704933Bacillus amyloliquefaciens XH7 chromosome, complete genomeribonucleoside-diphosphate reductase (alph)9e-1066.2
NC_017188:1172181:130219513021951303127933Bacillus amyloliquefaciens TA208 chromosome, complete genomeSPbeta phage ribonucleoside-diphosphate reductase, alpha subunit9e-1066.2
NC_002607:1221158:1221158122115812243133156Halobacterium sp. NRC-1, complete genomeNrdB25e-0963.5
NC_014219:2491021:2505595250559525081622568Bacillus selenitireducens MLS10 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent9e-0962.8
NC_013922:49587:7181471814760644251Natrialba magadii ATCC 43099 chromosome, complete genomeribonucleoside-diphosphate reductase, adenosylcobalamin-dependent6e-0653.5