Pre_GI Gene

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Host: NC_007356 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007356:202131 Dehalococcoides sp. CBDB1, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
202131202988858hypothetical proteinBLASTP
2031142042531140hypothetical proteinBLASTP
204507204848342hypothetical proteinBLASTP
204861205118258hypothetical proteinBLASTP
205206205532327hypothetical proteinBLASTP
205920206597678DNA-binding response regulatorQuickGO ontologyBLASTP
2065942078741281sensor histidine kinaseQuickGO ontologyBLASTP
207922208149228hypothetical protein
2081602097041545putative reductive dehalogenaseQuickGO ontologyBLASTP
209728210000273putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
210286210969684DNA-binding response regulatorQuickGO ontologyBLASTP
2109502127731824sensor histidine kinaseQuickGO ontologyBLASTP
212775213392618hypothetical protein
2138202152951476putative reductive dehalogenaseQuickGO ontologyBLASTP
215348215626279putative reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
2158112170341224putative membrane bound regulatory proteinQuickGO ontologyBLASTP
217167217922756hypothetical proteinBLASTP
217919218665747radical SAM domain proteinQuickGO ontologyBLASTP
218670219383714precorrin methylaseQuickGO ontologyBLASTP
219395220231837radical SAM domain proteinQuickGO ontologyBLASTP
220262221041780hypothetical proteinBLASTP
221047221787741radical SAM domain proteinQuickGO ontologyBLASTP
2217962235531758ribonucleotide reductaseQuickGO ontologyBLASTP
223546224085540cobIalamin adenosyltransferaseQuickGO ontologyBLASTP