Pre_GI: BLASTP Hits

Some Help

Query: NC_013552:1187299:1192264 Dehalococcoides sp. VS, complete genome

Start: 1192264, End: 1192899, Length: 636

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020387:1257163:126161612616161262251636Dehalococcoides mccartyi BTF08, complete genomeParB-like nuclease domain-containing protein1e-118425
NC_013890:1142500:114650911465091147144636Dehalococcoides sp. GT chromosome, complete genomeParB domain protein nuclease1e-118425
NC_007356:1165760:116891111689111169546636Dehalococcoides sp. CBDB1, complete genomehypothetical protein1e-105382
NC_020387:1257163:128225112822511282886636Dehalococcoides mccartyi BTF08, complete genomeParB-like nuclease domain-containing protein1e-78292
NC_013890:1142500:116059911605991161234636Dehalococcoides sp. GT chromosome, complete genomeParB domain protein nuclease3e-78291
NC_007432:654904:6757886757886770261239Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA methylase1e-1066.6
NC_015697:506494:5218415218415230701230Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase3e-0962
NC_018867:1407163:1430026143002614312731248Dehalobacter sp. CF chromosome, complete genomeDNA methylase N-4/N-65e-0961.2
NC_004668:3156247:318015031801503181040891Enterococcus faecalis V583, complete genomechromosome partitioning protein ParB family2e-0859.3
NC_009012:1934107:1965665196566519669631299Clostridium thermocellum ATCC 27405, complete genomeDNA methylase N-4/N-63e-0858.9
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein3e-0858.9
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0858.9
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase2e-0858.9
NC_018866:63498:837688376884706939Dehalobacter sp. DCA chromosome, complete genomeChromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J2e-0858.9
NC_018867:121512:149395149395150333939Dehalobacter sp. CF chromosome, complete genomeChromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J2e-0858.9
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase5e-0857.8
NC_018870:2316499:2354383235438323556361254Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase1e-0756.6
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease1e-0756.6
NC_016627:4323370:4352807435280743540601254Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase1e-0756.6
NC_013406:7092510:710599871059987106816819Paenibacillus sp. Y412MC10 chromosome, complete genomeparB-like partition protein1e-0756.2
NC_017200:5325977:534808453480845348956873Bacillus thuringiensis serovar finitimus YBT-020 chromosome,stage 0 sporulation protein J2e-0755.8
NC_005945:5202176:522125852212585222130873Bacillus anthracis str. Sterne, complete genomestage 0 sporulation protein J, putative2e-0755.8
NC_003997:5200805:521988752198875220759873Bacillus anthracis str. Ames, complete genomestage 0 sporulation protein J, putative2e-0755.8
NC_012659:5200831:521991352199135220785873Bacillus anthracis str. A0248, complete genomeputative stage 0 sporulation protein J2e-0755.8
NC_018866:63498:713477134772294948Dehalobacter sp. DCA chromosome, complete genomeChromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J2e-0755.5
NC_018867:121512:136974136974137921948Dehalobacter sp. CF chromosome, complete genomeChromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J2e-0755.5
NC_013958:29548:312183121832072855Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceparB-like partition protein2e-0755.5
NC_015520:2974048:2990245299024529914981254Mahella australiensis 50-1 BON chromosome, complete genomeParB domain-containing protein nuclease3e-0755.1
NC_004722:5381208:540426854042685405140873Bacillus cereus ATCC 14579, complete genomeStage 0 sporulation protein J3e-0755.1
NC_013406:7092510:710413971041397104978840Paenibacillus sp. Y412MC10 chromosome, complete genomeparB-like partition protein7e-0753.9
NC_016771:5191937:521405052140505214922873Bacillus cereus NC7401, complete genomestage 0 sporulation protein J7e-0753.9
NC_011658:5239509:526162352616235262495873Bacillus cereus AH187 chromosome, complete genomeputative stage 0 sporulation protein J7e-0753.9
NC_014410:800500:8099698099698112221254Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein1e-0653.5
NC_014392:2513529:252011025201102520952843Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeparB-like partition protein1e-0653.5
NC_020134:2948000:296655529665552967397843Clostridium stercorarium subsp. stercorarium DSM 8532, completeparB-like partition protein1e-0653.5
NC_007412:147757:151142151142152128987Anabaena variabilis ATCC 29413 plasmid C, complete sequenceParB-like partition protein1e-0653.1
NC_010320:1268355:1285298128529812865361239Thermoanaerobacter sp. X514 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0653.1
NC_009633:4097536:4125793412579341270281236Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0653.1
NC_002953:2773000:279391427939142794753840Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative DNA-binding protein2e-0652.4
NC_003923:2794686:281457428145742815413840Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-0652.4
NC_016633:3069518:3099711309971131009551245Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA modification methylase2e-0652.4
NC_014393:937000:9529689529689542211254Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0652
NC_003210:2879906:288021728802172881071855Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-0652
NC_011898:3367457:3396191339619133974321242Clostridium cellulolyticum H10, complete genomeDNA methylase N-4/N-6 domain protein6e-0650.8
NC_015697:468234:4808454808454820711227Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase7e-0650.8
NC_003909:386880:4081694081694094101242Bacillus cereus ATCC 10987, complete genomeDNA methylase, family protein8e-0650.4
NC_015510:1012195:101219510121951013127933Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeparB-like partition protein9e-0650.4