Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:3378759:3395866 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3395866, End: 3397047, Length: 1182

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:3269010:3270645327064532718261182Yersinia pseudotuberculosis PB1/+, complete genomeouter membrane assembly lipoprotein YfgL4e-178624
NC_017154:2876545:2896786289678628979671182Yersinia pestis D106004 chromosome, complete genomeputative lipoprotein9e-178623
NC_009381:2491427:2511793251179325129741182Yersinia pestis Pestoides F chromosome, complete genomeouter membrane protein assembly complex subunit YfgL9e-178623
NC_008150:2574794:2595147259514725963281182Yersinia pestis Antiqua, complete genomeputative lipoprotein9e-178623
NC_010159:409500:4302714302714314521182Yersinia pestis Angola, complete genomeputative lipoprotein9e-178623
NC_005810:3021913:3042555304255530437361182Yersinia pestis biovar Microtus str. 91001, complete genomeouter membrane protein assembly complex subunit YfgL9e-178623
NC_003143:3191246:3211574321157432127551182Yersinia pestis CO92, complete genomeputative lipoprotein9e-178623
NC_013282:3216226:3240293324029332414741182Cronobacter turicensis, complete genomeLipoprotein yfgL2e-170598
NC_011601:2854178:2872903287290328740811179Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeouter membrane protein assembly complex subunit YfgL4e-168590
NC_009800:2651730:2675113267511326762911179Escherichia coli HS, complete genomeouter membrane assembly lipoprotein YfgL9e-168589
NC_014618:1295322:1297261129726112984391179Enterobacter cloacae SCF1 chromosome, complete genomeouter membrane assembly lipoprotein YfgL3e-164578
NC_016632:1278500:1291479129147912926781200Serratia symbiotica str. 'Cinara cedri' chromosome, completeSubunit of Outer Membrane Protein Assembly Complex: BamB9e-134476
NC_007484:882341:8940948940948952121119Nitrosococcus oceani ATCC 19707, complete genomePyrrolo-quinoline quinone2e-66253
NC_014315:2485527:2492133249213324933051173Nitrosococcus watsoni C-113 chromosome, complete genomeouter membrane assembly lipoprotein Yfgl7e-66251
NC_016893:181951:1859361859361871261191Wigglesworthia glossinidia endosymbiont of Glossina morsitansputative lipoprotein precursor7e-44178
NC_015222:1127675:1140971114097111422271257Nitrosomonas sp. AL212 chromosome, complete genomeouter membrane assembly lipoprotein YfgL2e-42173
NC_014010:2689682:2703839270383927051971359Candidatus Puniceispirillum marinum IMCC1322 chromosome, completePyrrolo-quinoline quinone5e-27122
NC_014664:2373451:2373451237345123748691419Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomePyrrolo-quinoline quinone repeat-containing protein2e-23110
NC_014414:2569494:2585461258546125868881428Parvularcula bermudensis HTCC2503 chromosome, complete genomePQQ enzyme repeat family protein8e-23108
NC_014960:1670778:1689812168981216917041893Anaerolinea thermophila UNI-1, complete genomeputative protein kinase7e-22105
NC_014817:332000:3491253491253505281404Asticcacaulis excentricus CB 48 chromosome 2, complete sequencepyrrolo-quinoline quinone beta-propeller repeat9e-22104
NC_008686:2417000:2429742242974224310641323Paracoccus denitrificans PD1222 chromosome 1, complete sequencePyrrolo-quinoline quinone4e-1789.4
NC_013966:399215:4169304169304180841155Haloferax volcanii DS2 plasmid pHV4, complete sequencePQQ repeat protein1e-1378.2
NC_014933:510164:5148165148165196214806Bacteroides helcogenes P 36-108 chromosome, complete genomemetallophosphoesterase2e-1377
NC_013158:1620761:1624670162467016260431374Halorhabdus utahensis DSM 12940, complete genomePyrrolo-quinoline quinone3e-1376.6
NC_012416:753500:7867227867227878311110Wolbachia sp. wRi, complete genomePQQ enzyme repeat family protein5e-1375.9
NC_007681:218921:2425782425782438161239Methanosphaera stadtmanae DSM 3091, complete genomeconserved hypothetical membrane-spanning protein1e-1274.7
NC_012526:2155947:2182029218202921840051977Deinococcus deserti VCD115, complete genomeputative serine/threonine protein kinase1e-1274.7
NC_015703:4348545:4352994435299443541811188Runella slithyformis DSM 19594 chromosome, complete genomePyrrolo-quinoline quinone repeat-containing protein3e-1273.2
NC_007355:2481344:2497093249709325010283936Methanosarcina barkeri str. fusaro chromosome 1, complete sequencecell surface protein3e-1273.2
NC_019792:1320545:1323432132343213244991068Natronobacterium gregoryi SP2 chromosome, complete genomePQQ enzyme repeat-containing protein2e-1170.5
NC_019974:3013338:3043248304324830445311284Natronococcus occultus SP4, complete genomeWD40-like repeat protein1e-1068.2
NC_013966:107526:120702120702121448747Haloferax volcanii DS2 plasmid pHV4, complete sequence3e-1066.6
NC_013201:28381:4464144641472262586Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completeserine/threonine protein kinase8e-1065.1
NC_016582:9551123:9571959957195995741542196Streptomyces bingchenggensis BCW-1 chromosome, complete genomeserine/threonine protein kinase1e-0964.3
NC_018750:3481476:3508081350808135103092229Streptomyces venezuelae ATCC 10712, complete genomeputative serine or threonine protein kinase2e-0860.8
NC_013158:2046185:2083576208357620856932118Halorhabdus utahensis DSM 12940, complete genomePyrrolo-quinoline quinone2e-0860.5
NC_011206:1873297:1884622188462218858091188Acidithiobacillus ferrooxidans ATCC 53993, complete genomePyrrolo-quinoline quinone6e-0858.9
NC_000917:1246806:1249226124922612510671842Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein8e-0858.5
NC_019962:2654604:2660384266038426617091326Natrinema pellirubrum DSM 15624, complete genomeWD40-like repeat protein9e-0858.2
NC_007355:2237630:2247936224793622540466111Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein2e-0757.4
NC_007355:2481344:2503952250395225098615910Methanosarcina barkeri str. fusaro chromosome 1, complete sequencecell surface protein2e-0757.4
NC_016884:2701217:2704680270468027065301851Sulfobacillus acidophilus DSM 10332 chromosome, complete genomepyrrolo-quinoline quinone repeat-containing protein4e-0756.2
NC_015757:831285:8445088445088463461839Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein4e-0756.2
NC_009523:5298488:5309410530941053111761767Roseiflexus sp. RS-1 chromosome, complete genomePyrrolo-quinoline quinone6e-0755.5
NC_015510:2119336:2119336211933621212221887Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomemetallophosphoesterase7e-0755.5
NC_018750:6588206:6599565659956566013941830Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-0654.3
NC_020054:1666263:1671695167169516728911197Fibrella aestuarina BUZ 2 drat genomeSerine/threonine-protein kinase afsK2e-0653.9
NC_013202:1367447:1369572136957213708101239Halomicrobium mukohataei DSM 12286, complete genomePyrrolo-quinoline quinone3e-0653.5
NC_007205:1232734:1256441125644112577421302Candidatus Pelagibacter ubique HTCC1062, complete genomePQQ enzyme repeat family protein3e-0653.5
NC_009883:1262000:1263251126325112644951245Rickettsia bellii OSU 85-389, complete genomeWD40-like repeat protein3e-0653.1
NC_007940:266000:2675462675462687901245Rickettsia bellii RML369-C, complete genomeWD40-like repeat3e-0653.1
NC_014735:149922:1544241544241556591236Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completeWD-40 repeat-containing protein6e-0652.4
NC_007355:2237630:2237630223763022444486819Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein6e-0652.4
NC_015943:72000:8991289912910781167Haloarcula hispanica ATCC 33960 chromosome chromosome II, completePQQ repeat-containing protein6e-0652.4
NC_015707:1394227:140297214029721403703732Thermotoga thermarum DSM 5069 chromosome, complete genomePyrrolo-quinoline quinone repeat-containing protein6e-0652.4
NC_007355:2481344:2490112249011224956405529Methanosarcina barkeri str. fusaro chromosome 1, complete sequencecell surface protein6e-0652.4
NC_007355:2481344:2484625248462524883503726Methanosarcina barkeri str. fusaro chromosome 1, complete sequencecell surface protein7e-0652
NC_005295:845000:8670968670968682651170Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein7e-0652
NC_006831:821000:8430778430778442461170Ehrlichia ruminantium str. Gardel, complete genomehypothetical protein8e-0652
NC_003552:5203679:5208168520816852123284161Methanosarcina acetivorans C2A, complete genomecell surface protein8e-0652
NC_013216:2078444:2094880209488020973842505Desulfotomaculum acetoxidans DSM 771, complete genomePyrrolo-quinoline quinone8e-0652