Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3267319 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3267319, End: 3268152, Length: 834

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:506611:526583526583527515933Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-123441
NC_013971:3296272:330297433029743303807834Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-122437
NC_013961:441719:467493467493468326834Erwinia amylovora, complete genomehypothetical protein3e-122437
NC_014618:690056:724777724777725610834Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein6e-121433
NC_015761:299386:323688323688324521834Salmonella bongori NCTC 12419, complete genomeprophage protein3e-118424
CP002516:4236680:423714542371454237978834Escherichia coli KO11, complete genomehypothetical protein6e-118423
NC_016902:4236680:423714542371454237978834Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-118423
NC_005126:142500:143880143880144713834Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-117421
NC_015224:4386599:440557344055734406433861Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein9e-116416
NC_009436:522649:543427543427544260834Enterobacter sp. 638, complete genomehypothetical protein3e-115414
NC_003198:3881221:389765638976563898490835Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-112405
NC_011601:4856717:486895248689524869785834Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-111400
NC_009832:1946401:194640119464011947234834Serratia proteamaculans 568, complete genomehypothetical protein7e-105380
NC_011083:4547825:456346945634694564338870Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-94344
NC_012947:44512:483424834249187846Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-93341
NC_011750:4390000:441412244141224414964843Escherichia coli IAI39 chromosome, complete genomehypothetical protein6e-90330
NC_004431:4319152:434094043409404341782843Escherichia coli CFT073, complete genomehypothetical protein9e-90330
NC_008253:3161311:317591431759143176756843Escherichia coli 536, complete genomehypothetical protein4e-89327
NC_017328:3088907:313798331379833138825843Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-87322
NC_004337:3049118:309827830982783099120843Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-87322
NC_004741:3041294:308910530891053089947843Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-87322
NC_013364:3701895:375851637585163759358843Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-87322
AP010958:3669500:367350536735053674347843Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-87320
NC_013353:3669500:367350536735053674347843Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-87320
NC_007946:1119000:114154011415401142382843Escherichia coli UTI89, complete genomehypothetical protein5e-87320
NC_008253:334467:360025360025360849825Escherichia coli 536, complete genomehypothetical protein6e-81300
NC_011745:3405520:342622934262293426798570Escherichia coli ED1a chromosome, complete genome2e-58225
NC_015663:1869000:187050918705091871129621Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-56219
NC_007434:3973145:399854039985403999346807Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein8e-43174
NC_011000:1262324:130457513045751305381807Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-42172
NC_007651:3064530:313762131376213138604984Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein7e-42171
NC_011000:2732330:277862627786262779432807Burkholderia cenocepacia J2315 chromosome 1, complete sequencecosnerved hypothetical protein7e-42171
NC_016863:3905875:391249539124953912845351Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-41169
NC_016860:3964000:397409539740953974442348Salmonella enterica subsp. enterica serovar Typhimurium strATP-binding protein2e-41169
NC_015381:1588742:160234716023471603153807Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein5e-41168
NC_009076:3564500:360521936052193606025807Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein8e-41167
NC_011353:4688000:468806646880664688407342Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-1997.1
NC_002655:4653160:465394546539454654286342Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L1e-1997.1
NC_002695:4584177:458496245849624585303342Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1997.1
NC_010102:4745949:474832947483294748829501Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1273.2
NC_011205:4718239:472403647240364724536501Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-1272
NC_016831:4517850:452384745238474524347501Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1272
NC_008609:1976403:203721520372152038015801Pelobacter propionicus DSM 2379, complete genomehypothetical protein3e-1065.9
NC_002655:4653160:465452646545264654672147Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933L2e-0859.7
NC_005244:37546:4554745547473161770Pseudomonas sp. ND6 plasmid pND6-1, complete sequenceputative DNA modification methylase4e-0652