Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3259161 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3259161, End: 3259742, Length: 582

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:4114004:413312841331284133709582Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-69262
NC_011415:308825:316315316315316893579Escherichia coli SE11 chromosome, complete genomehypothetical protein8e-59226
NC_011283:4966471:500459950045995005177579Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-58223
NC_015663:1:262252622526863639Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-36150
AP010958:5272863:528136552813655281940576Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein3e-34144
NC_013353:5272863:528136552813655281940576Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-34144
NC_011750:4390000:439527743952774395843567Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-31135
NC_008253:3941938:397397239739723974538567Escherichia coli 536, complete genomehypothetical protein4e-31134
NC_011083:4547825:457880445788044579370567Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-30131
NC_011748:4950723:496683549668354967302468Escherichia coli 55989, complete genomehypothetical protein2e-28125
CU928145:4950723:496683549668354967302468Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-28125
NC_016612:2009927:203945420394542039843390Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-28123
NC_011745:291422:303545303545304108564Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-27122
NC_013353:3853082:388325738832573883820564Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-27121
AP010958:3853082:388325738832573883820564Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein2e-27121
NC_017328:1075535:108903210890321089595564Shigella flexneri 2002017 chromosome, complete genomehypothetical protein3e-27121
NC_009800:349592:355726355726356325600Escherichia coli HS, complete genomehypothetical protein7e-27120
NC_004741:3041294:306914030691403069739600Shigella flexneri 2a str. 2457T, complete genomehypothetical protein7e-27120
NC_004337:3049118:307696130769613077560600Shigella flexneri 2a str. 301, complete genomehypothetical protein7e-27120
NC_017328:3088907:311800831180083118607600Shigella flexneri 2002017 chromosome, complete genomehypothetical protein7e-27120
NC_010498:2278306:229595022959502296513564Escherichia coli SMS-3-5, complete genomehypothetical protein5e-27120
NC_011601:1114104:112681211268121127375564Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-26118
NC_002655:1448605:146186514618651462428564Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-26118
NC_002695:1364833:137809313780931378656564Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-26118
NC_002655:1053082:106625810662581066821564Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-26118
NC_013361:1284579:129868212986821299245564Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-26118
NC_007946:1073135:108878510887851089378594Escherichia coli UTI89, complete genomehypothetical protein2e-26118
NC_004431:279868:285387285387285986600Escherichia coli CFT073, complete genomehypothetical protein1e-25116
NC_011353:1307106:132171513217151322242528Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein7e-26116
NC_013008:1307392:132200113220011322528528Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-26116
NC_013364:1257801:127193812719381272465528Escherichia coli O111:H- str. 11128, complete genomehypothetical protein7e-26116
NC_004431:1119700:113536811353681135961594Escherichia coli CFT073, complete genomehypothetical protein4e-25114
NC_015663:549425:569816569816570412597Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein7e-21100
NC_010465:3431500:343178834317883432375588Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein4e-2097.8
NC_011740:2859933:286179828617982862229432Escherichia fergusonii ATCC 35469, complete genomehypothetical protein2e-1582
NC_009138:467268:4790134790134801641152Herminiimonas arsenicoxydans, complete genomehypothetical protein5e-0857.8
NC_013971:3296272:330693333069333307163231Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein8e-0857
NC_008542:197500:2068952068952081031209Burkholderia cenocepacia HI2424 chromosome 1, complete sequencehypothetical protein6e-0753.9
NC_009138:1843998:1874785187478518759151131Herminiimonas arsenicoxydans, complete genomehypothetical protein6e-0753.9
NC_009439:1297851:130712413071241308068945Pseudomonas mendocina ymp, complete genomehypothetical protein2e-0652.4
NC_017187:814940:820801820801821397597Arcobacter butzleri ED-1, complete genomehypothetical protein2e-0652