Pre_GI: BLASTP Hits

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Query: NC_012917:1923059:1945000 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1945000, End: 1945668, Length: 669

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:1611820:161641916164191617099681Serratia marcescens FGI94, complete genomedeoxyribose-phosphate aldolase2e-95348
NC_020209:1949500:195380919538091954492684Pseudomonas poae RE*1-1-14, complete genomedeoxyribose-phosphate aldolase2e-74278
NC_017243:314000:325956325956326606651Brachyspira intermedia PWS/A chromosome, complete genomedeoxyribose-phosphate aldolase2e-63242
NC_012225:1775264:178280317828031783456654Brachyspira hyodysenteriae WA1, complete genomeDeoxyribose-phosphate aldolase4e-63241
NC_014150:1123570:113656211365621137215654Brachyspira murdochii DSM 12563 chromosome, complete genomedeoxyribose-phosphate aldolase7e-63239
NC_014330:1957725:197055919705591971209651Brachyspira pilosicoli 95/1000 chromosome, complete genomedeoxyribose phosphate aldolase4e-62237
NC_019908:1296870:129770812977081298358651Brachyspira pilosicoli P43/6/78 chromosome, complete genomedeoxyribose phosphate aldolase4e-62237
NC_015425:718384:723648723648724316669Clostridium botulinum BKT015925 chromosome, complete genomedeoxyribose-phosphate aldolase7e-61233
NC_009617:4761000:476619247661924766842651Clostridium beijerinckii NCIMB 8052 chromosome, complete genomedeoxyribose-phosphate aldolase2e-58225
NC_020291:1810527:182424118242411824891651Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomedeoxyribose-phosphate aldolase DeoC3e-57221
NC_020291:5093138:510061751006175101267651Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomedeoxyribose-phosphate aldolase DeoC5e-57220
NC_013517:1916020:192665419266541927319666Sebaldella termitidis ATCC 33386, complete genomedeoxyribose-phosphate aldolase5e-57220
NC_011653:466007:475302475302476024723Thermosipho africanus TCF52B, complete genomedeoxyribose-phosphate aldolase7e-56216
NC_019978:2220863:222461022246102225281672Halobacteroides halobius DSM 5150, complete genomedeoxyribose-phosphate aldolase1e-55216
NC_009617:3647500:365032536503253650975651Clostridium beijerinckii NCIMB 8052 chromosome, complete genomedeoxyribose-phosphate aldolase3e-55214
NC_006270:4048876:406453640645364065207672Bacillus licheniformis ATCC 14580, complete genomedeoxyribose-phosphate aldolase4e-55214
NC_006322:4048990:406465040646504065321672Bacillus licheniformis ATCC 14580, complete genomeDra4e-55214
NC_007503:1383255:138844713884471389133687Carboxydothermus hydrogenoformans Z-2901, complete genomedeoxyribose-phosphate aldolase4e-54211
NC_002570:1426000:143898514389851439659675Bacillus halodurans C-125, complete genomedeoxyribose-phosphate aldolase4e-54211
NC_006055:140686:146034146034146696663Mesoplasma florum L1, complete genomedeoxyribose-phosphate aldolase7e-52203
NC_014960:2141345:216011821601182160870753Anaerolinea thermophila UNI-1, complete genomedeoxyribose-phosphate aldolase6e-51200
NC_015500:78223:818648186482514651Treponema brennaborense DSM 12168 chromosome, complete genomeDeoxyribose-phosphate aldolase9e-51199
NC_021064:1789980:180105918010591801709651Propionibacterium avidum 44067, complete genomedeoxyribose-phosphate aldolase1e-50199
NC_014364:4488875:449146244914624492118657Spirochaeta smaragdinae DSM 11293 chromosome, complete genomedeoxyribose-phosphate aldolase2e-49195
NC_010999:252605:274271274271274936666Lactobacillus casei, complete genomeDeoxyribose-phosphate aldolase (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA)1e-48192
NC_016024:1764516:177425617742561774924669Candidatus Chloracidobacterium thermophilum B chromosome chromosomedeoxyribose-phosphate aldolase5e-48190
NC_014624:1675500:171295317129531713612660Eubacterium limosum KIST612 chromosome, complete genomedeoxyribose-phosphate aldolase2e-47188
NC_011661:1332309:134283013428301343489660Dictyoglomus turgidum DSM 6724, complete genomedeoxyribose-phosphate aldolase5e-47187
NC_015437:27325:290242902429668645Selenomonas sputigena ATCC 35185 chromosome, complete genomedeoxyribose-phosphate aldolase1e-46186
NC_009828:469778:473611473611474345735Thermotoga lettingae TMO, complete genomedeoxyribose-phosphate aldolase3e-45181
NC_014624:551510:559741559741560400660Eubacterium limosum KIST612 chromosome, complete genomedeoxyribose-phosphate aldolase1e-44179
NC_011025:183287:223727223727224380654Mycoplasma arthritidis 158L3-1, complete genomedeoxyribose-phosphate aldolase1e-43176
NC_004663:5817782:582820358282035828919717Bacteroides thetaiotaomicron VPI-5482, complete genomedeoxyribose-phosphate aldolase4e-42171
NC_009012:1901492:191262919126291913297669Clostridium thermocellum ATCC 27405, complete genomedeoxyribose-phosphate aldolase2e-41168
NC_012704:1641684:1657667165766716602192553Corynebacterium kroppenstedtii DSM 44385, complete genomePhosphomannomutase4e-40164
NC_016627:689406:699397699397700086690Clostridium clariflavum DSM 19732 chromosome, complete genomedeoxyribose-phosphate aldolase5e-39160
NC_013517:3948500:394880439488043949472669Sebaldella termitidis ATCC 33386, complete genomedeoxyribose-phosphate aldolase2e-37155
NC_017277:1192485:120683712068371207514678Synechocystis sp. PCC 6803, complete genomedeoxyribose-phosphate aldolase8e-37153
NC_017052:1192099:120708012070801207757678Synechocystis sp. PCC 6803 substr. PCC-N, complete genomedeoxyribose-phosphate aldolase8e-37153
NC_017039:1192111:120709212070921207769678Synechocystis sp. PCC 6803 substr. PCC-P, complete genomedeoxyribose-phosphate aldolase8e-37153
NC_000911:1191445:120802012080201208697678Synechocystis sp. PCC 6803, complete genomedeoxyribose-phosphate aldolase8e-37153
NC_010546:3071377:307071930707193071384666Cyanothece sp. ATCC 51142 chromosome circular, complete sequencedeoxyribose-phosphate aldolase3e-36151
NC_014828:1795781:179938317993831800084702Ethanoligenens harbinense YUAN-3 chromosome, complete genomedeoxyribose-phosphate aldolase8e-36150
NC_020133:902000:903859903859904500642Mycobacterium liflandii 128FXT, complete genomedeoxyribose-phosphate aldolase DeoC2e-33142
NC_010612:957786:960089960089960769681Mycobacterium marinum M, complete genomedeoxyribose-phosphate aldolase DeoC2e-33142
NC_020409:621792:635802635802636320519Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative deoxyribose-phosphate aldolase (fragment)6e-30130
NC_014831:285759:287947287947288741795Thermaerobacter marianensis DSM 12885 chromosome, complete genomedeoxyribose-phosphate aldolase3e-29128
NC_015682:1457004:1462429146242914635501122Thermodesulfobacterium sp. OPB45 chromosome, complete genomeRibonuclease H1e-26120
NC_008578:591357:602318602318603025708Acidothermus cellulolyticus 11B, complete genomedeoxyribose-phosphate aldolase8e-26117
NC_011766:275673:281754281754282491738Desulfurococcus kamchatkensis 1221n chromosome, complete genomedeoxyribose-phosphate aldolase3e-24111
NC_009648:1882500:188281218828121883561750Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomedeoxyribose-phosphate aldolase7e-23107
NC_016845:2655512:265842726584272659176750Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,deoxyribose-phosphate aldolase5e-22104
NC_015152:3100312:311685631168563117560705Spirochaeta sp. Buddy chromosome, complete genomedeoxyribose-phosphate aldolase3e-2098.6
NC_016510:2426150:243419724341972434940744Flavobacterium columnare ATCC 49512 chromosome, complete genomedeoxyribose-phosphate aldolase5e-2097.8
NC_015696:610000:618889618889619617729Francisella sp. TX077308 chromosome, complete genomedeoxyribose-phosphate aldolase2e-1685.9
NC_009776:941964:961722961722962459738Ignicoccus hospitalis KIN4/I, complete genomedeoxyribose-phosphate aldolase4e-1478.2
NC_008818:956231:972157972157972870714Hyperthermus butylicus DSM 5456, complete genomeDeoxyribose-phosphate aldolase1e-1376.6
NC_007516:1810834:183401818340181834698681Synechococcus sp. CC9605, complete genomedeoxyribose-phosphate aldolase2e-1376.3
NC_016582:5769080:5786945578694557879611017Streptomyces bingchenggensis BCW-1 chromosome, complete genomedeoxyribose-phosphate aldolase2e-1375.9
NC_013956:3641368:367478736747873675656870Pantoea ananatis LMG 20103 chromosome, complete genomeDeoC1e-1170.1
NC_011565:777929:797966797966798820855Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,deoxyribose-phosphate aldolase2e-1168.9
NC_009485:8187321:821202582120258213011987Bradyrhizobium sp. BTAi1 chromosome, complete genomedeoxyribose-phosphate aldolase (DERA)3e-1168.9
NC_010694:715500:738092738092738871780Erwinia tasmaniensis, complete genomeDeoxyribose-phosphate aldolase 25e-1168.2
NC_014618:4010689:403831340383134039092780Enterobacter cloacae SCF1 chromosome, complete genomedeoxyribose-phosphate aldolase5e-1167.8
NC_015164:2777008:279250727925072793463957Bacteroides salanitronis DSM 18170 chromosome, complete genomedeoxyribose-phosphate aldolase6e-1167.8
NC_010729:2147268:216469521646952165624930Porphyromonas gingivalis ATCC 33277, complete genomeputative deoxyribose-phosphate aldolase2e-1065.9
NC_013716:5141269:516655551665555167334780Citrobacter rodentium ICC168, complete genomedeoxyribose-phosphate aldolase3e-1065.5
NC_015571:260664:277142277142278011870Porphyromonas gingivalis TDC60, complete genomedeoxyribose-phosphate aldolase3e-1065.1
NC_002950:2068500:208606120860612086930870Porphyromonas gingivalis W83, complete genomedeoxyribose-phosphate aldolase3e-1065.1
NC_008319:571821:574088574088574768681Synechococcus sp. CC9311, complete genomedeoxyribose-phosphate aldolase5e-0961.2
NC_017075:4880807:489676448967644897504741Rubrivivax gelatinosus IL144, complete genomedeoxyribose-phosphate aldolase DeoC3e-0755.5