Pre_GI: BLASTP Hits

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Query: NC_012668:1688500:1696475 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1696475, End: 1696768, Length: 294

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1363831:142214014221401422433294Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein3e-51200
NC_017270:1755552:178792217879221788140219Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein3e-36150
NC_009457:1444449:150384215038421504060219Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein3e-36150
NC_016944:1978058:199705719970571997266210Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-32137
NC_009092:1441813:145080814508081451473666Shewanella loihica PV-4, complete genometransposase5e-1476.3
NC_008577:2115440:212463021246302125307678Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-1375.1
NC_015663:1869000:187942718794271879816390Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-1375.1
NC_010473:247429:267096267096267722627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; conserved protein2e-1373.9
NC_000913:272071:291546291546292172627Escherichia coli K12, complete genomeCP4-6 prophage; conserved protein2e-1373.9
AC_000091:273325:291546291546292172627Escherichia coli W3110 DNA, complete genomehypothetical protein2e-1373.9
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-1373.2
NC_008322:2077628:208846620884662089143678Shewanella sp. MR-7, complete genomehypothetical protein9e-1372.4
NC_015379:908904:935764935764936426663Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative prophage4e-1270.1
NC_017328:1075535:109037810903781090674297Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-1168.9
NC_012691:2476223:249796124979612498647687Tolumonas auensis DSM 9187, complete genomehypothetical protein5e-1166.6
NC_000913:2746886:275856927585692759195627Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein4e-1166.6
AC_000091:2747520:275920327592032759829627Escherichia coli W3110 DNA, complete genomehypothetical protein4e-1166.6
NC_010473:2839902:285033428503342850960627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein4e-1166.6
NC_012759:2633949:264438126443812645007627Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein4e-1166.6
NC_010322:5293652:531395953139595314558600Pseudomonas putida GB-1 chromosome, complete genometransposase6e-1166.2
NC_013592:446092:463175463175463804630Dickeya dadantii Ech586, complete genomehypothetical protein7e-1165.9
NC_015761:299386:308796308796309416621Salmonella bongori NCTC 12419, complete genomeprophage protein2e-1064.7
NC_018691:3525430:356448435644843565281798Alcanivorax dieselolei B5 chromosome, complete genomeConserved prophage protein4e-1063.5
NC_013456:212150:228379228379229041663Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein6e-1062.8
NC_020418:116500:136581136581137168588Morganella morganii subsp. morganii KT, complete genometransposase1e-0962
NC_009832:1946401:195677919567791957375597Serratia proteamaculans 568, complete genomehypothetical protein3e-0960.8
NC_008321:1993541:200569020056902006352663Shewanella sp. MR-4, complete genomehypothetical protein3e-0960.5
NC_009708:915814:921173921173921802630Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-0960.1
NC_009901:1516340:152731215273121527938627Shewanella pealeana ATCC 700345, complete genometransposase4e-0960.1
NC_020181:5130513:514061751406175141201585Enterobacter aerogenes EA1509E, complete genomeFIG00947185: hypothetical protein6e-0959.7
NC_012912:1053618:107241210724121073035624Dickeya zeae Ech1591, complete genomeCP4-57 prophage; hypothetical protein9e-0958.9
NC_016944:514742:528313528313528957645Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-0858.5
NC_002505:514732:528305528305528949645Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-0858.5
NC_010634:1342393:135022813502281350812585Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0858.2
AP010958:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-0858.2
NC_013353:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-0858.2
NC_011751:3453683:350750035075003508105606Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-0857.4
NC_004431:3409389:348439734843973484966570Escherichia coli CFT073, complete genomehypothetical protein3e-0857.4
AP010958:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-0856.2
NC_013353:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0856.2
NC_013421:1505176:151089815108981511509612Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-0856.2
CP002797:2062006:208273220827322083301570Escherichia coli NA114, complete genomehypothetical protein5e-0856.2
NC_012691:1250385:127024212702421270910669Tolumonas auensis DSM 9187, complete genomehypothetical protein9e-0855.5
NC_013716:5201097:523347852334785234047570Citrobacter rodentium ICC168, complete genomehypothetical protein4e-0753.5
NC_014618:690056:703227703227703925699Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-0651.2
NC_009708:915814:924077924077924703627Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-0650.1