Pre_GI: BLASTP Hits

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Query: NC_012667:703852:714086 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 714086, End: 716197, Length: 2112

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2593800:2609628260962826117392112Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completephage integrase01453
NC_012668:442601:4525154525154546262112Vibrio cholerae MJ-1236 chromosome 1, complete sequencephage Integrase01453
NC_002505:168532:1843601843601864712112Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein01453
NC_016944:168530:1843581843581864692112Vibrio cholerae IEC224 chromosome I, complete sequencephage integrase01449
NC_015633:338000:345982345982346920939Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein3e-174612
NC_011663:5016488:5025424502542450275472124Shewanella baltica OS223 chromosome, complete genomehypothetical protein1e-93344
NC_015633:338000:348399348399349157759Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein7e-91335
NC_009665:5072413:5080948508094850829992052Shewanella baltica OS185 chromosome, complete genomehypothetical protein1e-78295
NC_016901:5130147:5138697513869751407482052Shewanella baltica OS678 chromosome, complete genomehypothetical protein1e-78295
NC_009997:5188221:5198075519807552001262052Shewanella baltica OS195, complete genomehypothetical protein1e-78295
NC_014541:1753776:1766341176634117683742034Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein4e-29130
NC_018678:554675:5643255643255662981974Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein2e-28128
NC_006856:95830:1048751048751068661992Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein4e-25117
NC_015633:2919501:2929159292915929311772019Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-23112
NC_012668:2258854:2268094226809422701212028Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-20100
NC_012668:1688500:1750926175092617529532028Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-20100
NC_012668:1623350:1631323163132316333502028Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-20100
NC_017187:1580988:1590257159025715921821926Arcobacter butzleri ED-1, complete genomephage integrase3e-1790.9
NC_012668:160357:1791201791201803761257Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-1687.4
NC_012856:2931995:2942536294253629441311596Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein3e-1584.3
NC_014541:4167916:4175938417593841779141977Ferrimonas balearica DSM 9799 chromosome, complete genomehypothetical protein4e-1584
NC_004578:5336773:5368939536893953709872049Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family2e-1378.2
NC_009901:2272206:2305253230525323072952043Shewanella pealeana ATCC 700345, complete genomeintegrase family protein8e-1376.3
NC_009901:4216206:4230609423060942326512043Shewanella pealeana ATCC 700345, complete genomeintegrase family protein8e-1376.3
NC_016613:2596464:2604864260486426070562193Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein2e-1171.6
NC_009434:608765:6626836626836647312049Pseudomonas stutzeri A1501, complete genomephage integrase family site specific recombinase5e-1170.5
NC_003919:4618988:4627179462717946291341956Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein7e-1169.7