Pre_GI: BLASTP Hits

Some Help

Query: NC_012660:2045398:2047798 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2047798, End: 2048763, Length: 966

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:1730534:173334717333471734282936Pseudomonas aeruginosa DK2 chromosome, complete genometransporter1e-105383
NC_014650:2097900:211991621199162120875960Geobacillus sp. Y4.1MC1 chromosome, complete genomesodium symporter7e-82304
NC_014829:3305762:331953833195383320494957Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeBile acid:sodium symporter1e-68260
NC_017512:642229:656712656712657704993Neisseria meningitidis WUE 2594, complete genomeSolute carrier family 10 member 6 Sodium-dependent organic anion transporter3e-64245
NC_003116:867943:885863885863886810948Neisseria meningitidis Z2491, complete genometransmembrane transport protein3e-64245
NC_017501:1633436:163630516363051637252948Neisseria meningitidis 8013, complete genomeputative transporter1e-59229
NC_017518:795113:813591813591814538948Neisseria meningitidis NZ-05/33 chromosome, complete genometransporter, bile acid/Na+ symporter family3e-59229
NC_017514:1520245:152024515202451521192948Neisseria meningitidis M01-240149 chromosome, complete genometransporter, bile acid/Na+ symporter family3e-59229
NC_017515:1555500:155554015555401556487948Neisseria meningitidis M04-240196 chromosome, complete genometransporter, bile acid/Na+ symporter family9e-59227
NC_017517:749031:768328768328769275948Neisseria meningitidis M01-240355 chromosome, complete genometransporter, bile acid/Na+ symporter family9e-59227
NC_017505:721395:739873739873740865993Neisseria meningitidis alpha710 chromosome, complete genomeputative transmembrane transport protein7e-59227
NC_010120:662969:678396678396679343948Neisseria meningitidis 053442, complete genomebile acid:Na+ symporter, BASS family3e-58225
NC_003112:719490:736948736948737895948Neisseria meningitidis MC58, complete genometransporter3e-58225
NC_013016:633313:648431648431649423993Neisseria meningitidis alpha14 chromosome, complete genomeputative transmembrane transport protein4e-58225
NC_017347:2437902:243909524390952439964870Staphylococcus aureus subsp. aureus T0131 chromosome, completeBASS family bile acid:sodium (Na+) symporter8e-58224
NC_016077:113246:1314381314381324421005Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein1e-51203
NC_014550:7560:127191271913690972Arthrobacter arilaitensis Re117, complete genomeputative sodium-dependent transporter2e-48192
NC_016027:194842:198286198286199206921Gluconacetobacter xylinus NBRC 3288, complete genomeNa+-dependent transporter4e-46185
NC_016077:1278104:130054213005421301513972Acidaminococcus intestini RyC-MR95 chromosome, complete genomeBASS-family bile acid-sodium transporter4e-45181
NC_014532:3967463:397111939711193972069951Halomonas elongata DSM 2581, complete genomeK03453 bile acid:Na+ symporter, BASS family2e-41169
NC_015588:2939747:296172629617262962697972Isoptericola variabilis 225 chromosome, complete genomeBile acid:sodium symporter9e-40164
NC_006395:161455:178828178828179661834Haloarcula marismortui ATCC 43049 plasmid pNG700, completesodium-dependent transporter1e-38160
NC_004113:1137754:115815111581511158969819Thermosynechococcus elongatus BP-1, complete genomeputative sodium-dependent transporter2e-37156
NC_016790:1152249:116290611629061163880975Corynebacterium diphtheriae VA01 chromosome, complete genomeputative sodium-dependent transport membrane protein7e-37154
NC_016802:1186326:119542211954221196396975Corynebacterium diphtheriae HC02 chromosome, complete genomeputative sodium-dependent transport membrane protein2e-36153
NC_016789:1232993:124007112400711241045975Corynebacterium diphtheriae PW8 chromosome, complete genomeputative sodium-dependent transport membrane protein6e-36151
NC_015703:1898159:190226719022671903202936Runella slithyformis DSM 19594 chromosome, complete genomeBile acid:sodium symporter2e-35150
NC_007513:632884:632884632884633819936Synechococcus sp. CC9902, complete genomesodium/bile acid cotransporter family2e-32139
NC_015944:10500:144381443815367930Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequencesodium-dependent transporter4e-32138
NC_015683:1176449:119493511949351195915981Corynebacterium ulcerans BR-AD22 chromosome, complete genomesolute carrier family 10 member 62e-29129
NC_016800:1219121:122460412246041225062459Corynebacterium diphtheriae BH8 chromosome, complete genomeputative sodium-dependent transport membrane protein2e-2099.8
NC_016785:1167057:117642011764201177127708Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative sodium-dependent transport membrane protein2e-1996.7
NC_018721:2017737:203552620355262036404879Psychroflexus torquis ATCC 700755 chromosome, complete genomesolute:Na+ symporter, BASS family1e-1584.3
NC_016943:1956719:195671919567191957612894Blastococcus saxobsidens DD2, complete genomeputative transporter, bile acid/Na+ symporter family3e-1376.3
NC_009656:3733913:375192137519213752814894Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transporter3e-1376.3
NC_016783:1216708:122197312219731222671699Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative sodium-dependent transport membrane protein2e-1273.6
NC_019673:3726519:373944337394433740318876Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1273.2
NC_016800:1219121:122516612251661225474309Corynebacterium diphtheriae BH8 chromosome, complete genomeSodium/bile acid cotransporter 44e-1272.4
NC_009439:2337024:236142223614222362354933Pseudomonas mendocina ymp, complete genomebile acid:sodium symporter2e-1170.5
NC_008319:962968:968050968050968904855Synechococcus sp. CC9311, complete genometransporter, bile acid/Na+ symporter family protein2e-1170.1
NC_016783:1216708:122269112226911222948258Corynebacterium diphtheriae INCA 402 chromosome, complete genomeIleal sodium/bile acid cotransporter, ileal6e-0962