Pre_GI: BLASTP Hits

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Query: NC_012660:1737423:1740704 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 1740704, End: 1741582, Length: 879

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:3262000:327625932762593277137879Pseudomonas poae RE*1-1-14, complete genomeputative capsid scafolding protein1e-137489
NC_003902:3514000:353195935319593532801843Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related capsid scaffold protein2e-75282
NC_010943:325739:326789326789327652864Stenotrophomonas maltophilia K279a, complete genomepresumed capsid scaffolding protein (gpo)6e-61234
NC_015856:1152021:116838711683871169373987Collimonas fungivorans Ter331 chromosome, complete genomeputative bacteriophage protein5e-57221
NC_014323:992978:994790994790995632843Herbaspirillum seropedicae SmR1 chromosome, complete genomephage-related capsid scaffold bacteriophage protein2e-53209
NC_007963:1582089:158574715857471586562816Chromohalobacter salexigens DSM 3043, complete genomephage capsid scaffolding3e-51202
NC_017047:4037674:405581740558174056668852Rahnella aquatilis HX2 chromosome, complete genomecapsid scaffolding protein2e-51202
NC_015061:1598920:161885616188561619707852Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding7e-51201
NC_015061:596247:623225623225624076852Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding3e-50198
NC_003295:2111730:211173021117302112569840Ralstonia solanacearum GMI1000, complete genomePROBABLE BACTERIOPHAGE PROTEIN2e-49196
NC_008800:1870596:187241418724141873268855Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phage capsid scaffolding protein1e-48193
NC_012917:3565268:358854235885423589396855Pectobacterium carotovorum subsp. carotovorum PC1, complete genomecapsid scaffolding4e-48191
NC_014306:103545:121387121387122223837Erwinia billingiae Eb661, complete genomePutative phage capsid scaffolding protein4e-47188
NC_012724:1892000:190577019057701906642873Burkholderia glumae BGR1 chromosome 1, complete genomePhage capsid scaffolding protein1e-45183
NC_011205:2938356:294064529406452941478834Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage capsid scaffolding protein3e-44178
NC_011149:2802199:280540128054012806234834Salmonella enterica subsp. enterica serovar Agona str. SL483,phage capsid scaffolding protein9e-44177
NC_016845:1773416:178768417876841788517834Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Presumed capsid scaffolding protein (GpO)8e-43174
NC_013956:3525711:352816235281623529124963Pantoea ananatis LMG 20103 chromosome, complete genomeO1e-42173
NC_007613:761234:775348775348776181834Shigella boydii Sb227, complete genomeputative capsid scaffolding protein1e-42173
NC_012947:2898179:289874428987442899496753Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecapsid scaffolding1e-42173
NC_020260:312805:331321331321332148828Cronobacter sakazakii Sp291, complete genomecapsid scaffold-like protein4e-42172
NC_016845:4046142:406473640647364065590855Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage capsid scaffolding protein1e-41170
NC_009648:3803622:382293638229363823790855Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage capsid scaffolding protein3e-41169
NC_014306:1244721:125997012599701260824855Erwinia billingiae Eb661, complete genomecapsid scaffolding protein5e-41168
NC_013008:2824511:282451128245112825365855Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage capsid scaffolding protein GpO8e-41167
NC_011353:2825500:282553128255312826385855Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage capsid scaffolding protein GpO8e-41167
NC_020181:5182568:518371251837125184566855Enterobacter aerogenes EA1509E, complete genomePhage capsid scaffolding protein3e-40165
NC_010694:614985:639310639310640173864Erwinia tasmaniensis, complete genomePutative capsid scaffolding protein5e-40164
NC_003198:4453457:449222544922254493058834Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative capsid protein1e-39164
NC_006511:2677964:268046026804602681293834Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative capsid protein1e-39164
NC_016818:1605918:162268916226891623534846Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePhage capsid scaffolding protein (GPO) serine peptidase1e-39164
NC_017047:1551836:156944015694401570285846Rahnella aquatilis HX2 chromosome, complete genomecapsid scaffolding protein9e-40164
NC_016810:2871689:287344528734452874278834Salmonella enterica subsp. enterica serovar Typhimurium strputative capsid protein8e-40164
NC_016857:2871689:287344528734452874278834Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative capsid protein8e-40164
NC_017046:2869873:287218728721872873020834Salmonella enterica subsp. enterica serovar Typhimurium str. 798capsid protein8e-40164
NC_014837:3766426:377019137701913771024834Pantoea sp. At-9b chromosome, complete genomecapsid scaffolding2e-39162
NC_012724:147454:150329150329151141813Burkholderia glumae BGR1 chromosome 1, complete genomePhage capsid scaffolding protein (GPO)3e-39162
NC_012962:4942000:495355249535524954388837Photorhabdus asymbiotica, complete genomeputative capsid scaffolding protein1e-37157
NC_020211:4598217:460162646016264602441816Serratia marcescens WW4, complete genomephage capsid scaffolding protein GpO4e-36152
NC_013282:3389619:339300833930083393754747Cronobacter turicensis, complete genomePresumed capsid-scaffolding protein1e-33143
NC_017059:3688688:369059536905953691395801Rhodospirillum photometricum DSM 122, complete genomePhage-related capsid scaffolding protein (GPO-like)1e-30133
NC_008750:3314309:332613733261373327057921Shewanella sp. W3-18-1, complete genomephage capsid scaffolding2e-29129
NC_015224:3291736:330998633099863310507522Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Phage capsid scaffolding1e-25117
NC_008751:3214000:321582532158253216673849Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage capsid scaffolding8e-25114
NC_008751:1762562:176433317643331765193861Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage capsid scaffolding9e-25114
NC_013592:804288:830223830223831059837Dickeya dadantii Ech586, complete genomecapsid scaffolding4e-24112
NC_014500:894136:929517929517930359843Dickeya dadantii 3937 chromosome, complete genomeputative capsid scaffolding protein5e-24111
NC_009348:4135002:413857741385774139449873Aeromonas salmonicida subsp. salmonicida A449, complete genomephage capsid scaffolding protein1e-23110
NC_011883:269497:288701288701289531831Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,capsid scaffolding3e-21102
NC_009656:5185704:5201873520187352030181146Pseudomonas aeruginosa PA7 chromosome, complete genomescaffold8e-21100
NC_013892:992811:998643998643999482840Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-2097.8
NC_012125:894955:929828929828930631804Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-1994.7
NC_015061:2770856:277085627708562771695840Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding2e-1893.2