Pre_GI: BLASTP Hits

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Query: NC_012660:165559:196625 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 196625, End: 199513, Length: 2889

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5723787:5732718573271857356932976Pseudomonas fluorescens Pf-5, complete genomehypothetical protein01639
NC_010125:3667452:3682362368236236848902529Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein6e-118426
NC_007650:2429307:2455275245527524581422868Burkholderia thailandensis E264 chromosome II, complete sequenceDNA primase2e-103377
NC_006351:520500:5228525228525257192868Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein8e-101369
NC_009074:94000:9434694346971982853Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein1e-99365
NC_008542:2631138:2632749263274926356252877Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceinner membrane protein1e-98362
NC_008060:1945597:1947208194720819500842877Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceinner membrane protein1e-98362
NC_012724:3222415:3224293322429332271692877Burkholderia glumae BGR1 chromosome 1, complete genomeInner membrane protein9e-99362
NC_009256:458649:4586494586494615252877Burkholderia vietnamiensis G4 chromosome 1, complete sequenceinner membrane protein1e-98361
NC_009076:106807:1102561102561131082853Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein2e-98360
NC_010508:2776283:2778117277811727809782862Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencePrimase 24e-98360
NC_007434:1322500:1346373134637313492342862Burkholderia pseudomallei 1710b chromosome I, complete sequenceinner membrane protein1e-97358
NC_013209:867500:8854638854638880242562Acetobacter pasteurianus IFO 3283-01, complete genomeDNA/RNA helicase3e-94347
NC_017100:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-03, complete genomeDNA/RNA helicase3e-94347
NC_017108:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-12, complete genomeDNA/RNA helicase3e-94347
NC_017111:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-32, complete genomeDNA/RNA helicase3e-94347
NC_017121:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-07, complete genomeDNA/RNA helicase3e-94347
NC_017125:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-22, complete genomeDNA/RNA helicase3e-94347
NC_017146:867500:8854578854578880182562Acetobacter pasteurianus IFO 3283-26, complete genomeDNA/RNA helicase3e-94347
NC_017033:2081206:2102598210259821043941797Frateuria aurantia DSM 6220 chromosome, complete genomeDNA/RNA helicase4e-94346
NC_014121:1101093:1113609111360911162962688Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completezinc-binding domain of primase-helicase family protein3e-92340
NC_011094:380428:3832303832303859022673Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-92339
NC_015968:3301958:3325863332586333285352673Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein6e-92339
CP002797:2472908:2472908247290824755952688Escherichia coli NA114, complete genomeputative phage protein5e-92339
NC_011083:2542876:2556453255645325591402688Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,zinc-binding domain of primase-helicase family9e-92338
NC_011740:810411:8262408262408289122673Escherichia fergusonii ATCC 35469, complete genomePutative inner membrane protein (modular protein) from phage origin2e-91337
NC_009778:2951207:2967702296770229701372436Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-90334
NC_011083:2847318:2858008285800828600772070Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein7e-90332
NC_003197:2870268:2883501288350128855702070Salmonella typhimurium LT2, complete genomeputative inner membrane protein7e-90332
NC_016810:2871689:2906066290606629081352070Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein7e-90332
NC_016856:2896630:2903726290372629057952070Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein7e-90332
NC_016857:2871689:2906066290606629081352070Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein7e-90332
NC_016860:2896254:2907067290706729091362070Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein7e-90332
NC_016863:2844883:2851979285197928540482070Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein7e-90332
NC_017046:2896651:2904808290480829068772070Salmonella enterica subsp. enterica serovar Typhimurium str. 798inner membrane protein7e-90332
NC_013956:4326388:4327056432705643297282673Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha2e-89331
NC_011751:3048490:3054619305461930566882070Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-89330
NC_015224:3291736:3306358330635833090422685Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Zinc-binding domain of primase-helicase family8e-88325
NC_016027:1851737:1851737185173718543342598Gluconacetobacter xylinus NBRC 3288, complete genomeDNA/RNA helicase2e-87324
NC_012559:1635922:1653880165388016556671788Laribacter hongkongensis HLHK9, complete genomeinner membrane protein7e-81302
NC_005085:4157257:4161249416124941629791731Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-73278
NC_015061:1251905:1265618126561812682932676Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-73276
NC_011883:1422650:1438897143889714404441548Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,protein of unknown function DUF9277e-73276
NC_015379:1151143:117052111705211171060540Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein4e-71270
NC_010511:915313:9192619192619220532793Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein8e-71269
NC_016026:2170500:2181687218168721836962010Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein4e-65250
NC_015381:992401:1007868100786810106602793Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein5e-65250
NC_015379:1151143:117004711700471170427381Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein9e-60232
NC_011894:672270:6759426759426774501509Methylobacterium nodulans ORS 2060, complete genome1e-57226
NC_012559:1635922:1652701165270116537831083Laribacter hongkongensis HLHK9, complete genomeinner membrane protein6e-55216
NC_008322:373531:3856643856643873251662Shewanella sp. MR-7, complete genomeSuperfamily II helicase and inactivated derivatives-like protein3e-54214
NC_012559:2353236:2357067235706723588361770Laribacter hongkongensis HLHK9, complete genomeputative prophage primase9e-50199
NC_013892:671000:6938526938526965482697Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase1e-40169
NC_010694:2716348:2731726273172627345542829Erwinia tasmaniensis, complete genomePutative prophage primase2e-40168
NC_014922:1360000:1361398136139813635902193Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein2e-39165
NC_011094:638552:6579916579916601322142Salmonella enterica subsp. enterica serovar Schwarzengrund strP4 alpha zinc-binding domain-containing protein6e-39163
NC_013592:2703327:2707294270729427099932700Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF9272e-38162
NC_014500:2019113:2039592203959220423602769Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC2e-37158
NC_014500:3744705:3757707375770737603432637Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC7e-37156
NC_013892:1272448:1299079129907913018532775Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase2e-36155
NC_012880:2778795:2782217278221727848532637Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF9272e-36155
NC_015566:4350080:4373105437310543752132109Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-35152
CU928145:299080:3023023023023044342133Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-33145
NC_011748:299080:3023023023023044342133Escherichia coli 55989, complete genomehypothetical protein1e-33145
NC_002663:1988000:2004283200428320064602178Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein1e-29132
NC_007712:4023516:4054746405474640557921047Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-23112
NC_009648:3224495:323941532394153240143729Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-23111
NC_007712:2806500:281257128125712813332762Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-20101
NC_010172:280092:2811792811792829211743Methylobacterium extorquens PA1, complete genomeSuperfamily II helicase and inactivated derivatives-like protein6e-1894
NC_007005:98488:118370118370118735366Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein8e-1790.1
NC_012808:58701:7756377563792241662Methylobacterium extorquens AM1, complete genomehypothetical protein3e-1585.1
NC_015676:1530000:1539899153989915424302532Methanosalsum zhilinae DSM 4017 chromosome, complete genomehypothetical protein3e-1584.7
NC_014393:1022843:1027660102766010303412682Clostridium cellulovorans 743B chromosome, complete genomeBifunctional DNA primase/polymerase9e-1479.7
NC_012416:1079661:1111634111163411138292196Wolbachia sp. wRi, complete genomeregulatory protein RepA, putative2e-1378.6
NC_012416:573202:6051756051756073702196Wolbachia sp. wRi, complete genomeregulatory protein RepA, putative2e-1378.6
NC_002978:549454:5641755641755662232049Wolbachia endosymbiont of Drosophila melanogaster, complete genomeregulatory protein RepA, putative7e-1377
NC_014614:2643203:2651210265121026530631854Clostridium sticklandii, complete genomehypothetical protein8e-1376.6
NC_013209:867500:885083885083885466384Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein1e-1276.3
NC_017100:867500:885077885077885460384Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein1e-1276.3
NC_017108:867500:885077885077885460384Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein1e-1276.3
NC_017111:867500:885077885077885460384Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein1e-1276.3
NC_017121:867500:885077885077885460384Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein1e-1276.3
NC_017125:867500:885077885077885460384Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein1e-1276.3
NC_017146:867500:885077885077885460384Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein1e-1276.3
NC_010981:1371265:1390240139024013923992160Wolbachia pipientis, complete genomeputative phage related protein1e-1275.9
NC_010125:3667452:368205136820513682365315Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-1275.5
UCMB5137:140766:1613951613951638092415Bacillus atrophaeus UCMB-5137hypothetical protein4e-1274.3
NC_014307:233045:2474232474232495462124Ralstonia solanacearum CFBP2957 chromosome, complete genometoprim domain protein6e-1273.6
NC_016818:1291665:130461313046131305110498Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete6e-1170.5
NC_012796:3374911:3419227341922734221392913Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1068.6
NC_016027:1851737:185433818543381854640303Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein3e-1068.2
NC_015422:2078618:2103438210343821057382301Alicycliphilus denitrificans K601 chromosome, complete genomephage/plasmid primase, P4 family4e-1067.8
NC_016048:3947663:3944818394481839476852868Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-0965.5
NC_007645:5801295:5801295580129558035712277Hahella chejuensis KCTC 2396, complete genomepredicted ATPase1e-0863.2
NC_009256:3601080:3601080360108036034072328Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein2e-0862.4
NC_003295:856775:8796328796328819292298Ralstonia solanacearum GMI1000, complete genomehypothetical protein3e-0861.6
NC_014311:198542:2200012200012222802280Ralstonia solanacearum PSI07 chromosome, complete genomeDNA primase, phage/plasmid5e-0860.8
NC_014624:2944437:2955376295537629572591884Eubacterium limosum KIST612 chromosome, complete genomeSuperfamily II helicase and inactivated derivatives-like1e-0759.7
NC_014624:1235818:1241220124122012431031884Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0759.7
NC_008751:1043269:1083858108385810860742217Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid/phage primase, P4 family2e-0758.5
NC_013525:1871795:1898273189827319002371965Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomezinc finger CHC2-family protein3e-0758.5
NC_014972:480355:4964064964064988622457Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein3e-0758.2
NC_015761:2373967:2373967237396723770893123Salmonella bongori NCTC 12419, complete genomebacteriophage DNA primase4e-0757.8
NC_014010:175500:1813701813701832171848Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeAAA ATPase8e-0756.6
NC_002951:49535:4953549535513041770Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein1e-0656.2
NC_014310:1822751:186755518675551868433879Ralstonia solanacearum PSI07 megaplasmid, complete sequence2e-0655.8
NC_017030:8599515:8615278861527886180072730Corallococcus coralloides DSM 2259 chromosome, complete genomeBifunctional DNA Primase/polymerase2e-0655.5
NC_013722:2150882:2178543217854321806332091Xanthomonas albilineans, complete genomehypothetical protein3e-0655.1