Pre_GI: BLASTP Hits

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Query: NC_011959:1965158:1977016 Thermomicrobium roseum DSM 5159, complete genome

Start: 1977016, End: 1978215, Length: 1200

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014297:476510:5207865207865220061221Halalkalicoccus jeotgali B3 chromosome, complete genomeMandelate racemase/muconate lactonizing protein8e-42171
NC_011959:1965158:1974154197415419753261173Thermomicrobium roseum DSM 5159, complete genome2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase6e-40165
NC_016745:1472000:1477793147779314789741182Oceanimonas sp. GK1 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-36153
NC_014298:310964:3400563400563413211266Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing protein8e-36151
NC_014550:3534000:3547607354760735487551149Arthrobacter arilaitensis Re117, complete genomegalactonate dehydratase2e-35150
NC_008541:2119883:2139544213954421407311188Arthrobacter sp. FB24 chromosome 1, complete sequenceMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein7e-35148
NC_008010:200796:2158792158792170271149Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme-like5e-35148
NC_008380:4078670:4081119408111940822851167Rhizobium leguminosarum bv. viciae 3841, complete genomeputative mandelate racemase/muconate lactonising family protein1e-34147
NC_003888:3817000:3835870383587038370031134Streptomyces coelicolor A3(2), complete genomeisomerase1e-34147
NC_019964:1873167:1890729189072918920331305Halovivax ruber XH-70, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase3e-34146
NC_006396:508802:5107795107795120291251Haloarcula marismortui ATCC 43049 chromosome I, complete sequencemandelate racemase/muconate lactonizing enzyme family2e-33143
NC_014363:8228:1919219192203371146Olsenella uli DSM 7084 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-33143
NC_019974:2421422:2444798244479824460361239Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase8e-33141
NC_017047:2957957:2959435295943529605831149Rahnella aquatilis HX2 chromosome, complete genomegalactonate dehydratase1e-32141
NC_015061:2927707:2929186292918629303341149Rahnella sp. Y9602 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-32141
NC_006510:1995916:1999092199909220002401149Geobacillus kaustophilus HTA426, complete genomegalactonate dehydratase1e-32140
NC_009256:3056000:3075584307558430767321149Burkholderia vietnamiensis G4 chromosome 1, complete sequencegalactonate dehydratase2e-32140
NC_007948:4558000:4596945459694545981051161Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme6e-31135
NC_019974:1184871:1230980123098012321311152Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase1e-30134
NC_010498:1094000:1110613111061311117611149Escherichia coli SMS-3-5, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-30134
NC_007963:3553678:3562167356216735633391173Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme6e-30132
NC_013037:6281164:6338780633878063399581179Dyadobacter fermentans DSM 18053, complete genomeMandelate racemase/muconate lactonizing protein3e-29129
NC_002689:1228061:1250055125005512512211167Thermoplasma volcanium GSS1, complete genomeGalactonate dehydratase6e-29128
NC_019978:2532640:2540084254008425412321149Halobacteroides halobius DSM 5150, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase1e-28127
NC_007948:4646344:4658443465844346595701128Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme6e-28125
NC_014364:815346:8539138539138551031191Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeMandelate racemase/muconate lactonizing protein6e-28125
NC_012588:2173907:2188053218805321893121260Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-27124
NC_012623:355393:3614623614623627211260Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-27124
NC_012726:2179085:2190726219072621919851260Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-27124
NC_017276:2080102:2096193209619320974521260Sulfolobus islandicus REY15A chromosome, complete genomemandelate racemase (MR) subfamily1e-27124
NC_012589:2303096:2317250231725023185091260Sulfolobus islandicus L.S.2.15, complete genomeMandelate racemase/muconate lactonizing protein1e-27124
NC_008786:3915000:3937759393775939390541296Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein3e-27123
NC_014541:643604:6616346616346627551122Ferrimonas balearica DSM 9799 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-27123
NC_008786:3045770:3053931305393130551271197Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein2e-27123
NC_012632:2279544:2293690229369022949491260Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-27122
NC_007181:1766910:1776768177676817778861119Sulfolobus acidocaldarius DSM 639, complete genomemandelate racemase/muconate lactonizing enzyme3e-26120
NC_011959:1965158:1975415197541519766771263Thermomicrobium roseum DSM 5159, complete genomemandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme1e-25118
NC_013730:7355010:7368559736855973699831425Spirosoma linguale DSM 74, complete genomeGalactonate dehydratase2e-25116
NC_009800:1657550:1676062167606216772761215Escherichia coli HS, complete genomestarvation-sensing protein RspA6e-25115
NC_017093:2357583:2375715237571523769681254Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme2e-24114
NC_013174:2564979:2576791257679125780201230Jonesia denitrificans DSM 20603, complete genomemandelate racemase/muconate-lactonizing protein2e-24114
NC_005877:509877:5132215132215143961176Picrophilus torridus DSM 9790, complete genomegluconate/galactonate dehydratase1e-24114
NC_008380:4078670:4083728408372840849271200Rhizobium leguminosarum bv. viciae 3841, complete genomeputative madelate racemase/muconate lactonising family protein9e-25114
NC_012850:3454270:3455189345518934563341146Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeMandelate racemase/muconate lactonizing protein1e-23111
NC_015151:665346:6873766873766884791104Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-23110
NC_014306:2518996:2518996251899625202491254Erwinia billingiae Eb661, complete genomeGalactonate dehydratase2e-23110
NC_009664:4696961:4757316475731647584161101Kineococcus radiotolerans SRS30216, complete genomeMandelate racemase/muconate lactonizing protein6e-23108
NC_008380:4078670:4082349408234940837101362Rhizobium leguminosarum bv. viciae 3841, complete genomeputative mandelate racemase/muconate lactonising family protein6e-23108
NC_010995:3640913:3645577364557736467851209Cellvibrio japonicus Ueda107, complete genomeStarvation sensing protein rspA1e-22107
NC_011887:72364:8731387313885031191Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeMandelate racemase/muconate lactonizing protein3e-22106
NC_013517:1038000:1039918103991810411171200Sebaldella termitidis ATCC 33386, complete genomeMandelate racemase/muconate lactonizing protein3e-22106
NC_013956:663295:6822426822426834951254Pantoea ananatis LMG 20103 chromosome, complete genomeRspA1e-21104
NC_003305:1297785:1319671131967113208581188Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-20100
NC_016612:178864:1816411816411828941254Klebsiella oxytoca KCTC 1686 chromosome, complete genomedehydratase3e-2099.8
NC_015563:313283:3329173329173341041188Delftia sp. Cs1-4 chromosome, complete genomeL-rhamnonate dehydratase1e-1894.4
NC_019974:1184871:1201337120133712024221086Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase1e-1791.3
NC_014500:564864:5660205660205673661347Dickeya dadantii 3937 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein3e-1790.1
NC_009379:435404:4563424563424574751134Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein8e-1788.6
NC_012669:1011473:1016366101636610176671302Beutenbergia cavernae DSM 12333, complete genomeMandelate racemase/muconate lactonizing protein1e-1688.2
NC_011740:1494796:1510509151050915117171209Escherichia fergusonii ATCC 35469, complete genomeputative mandelate racemase1e-1687.8
NC_003911:2540453:2565441256544125666101170Silicibacter pomeroyi DSS-3, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-1687
NC_012632:538967:5428355428355439531119Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-1686.7
NC_009440:1045882:1054839105483910559811143Metallosphaera sedula DSM 5348 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-1686.7
NC_008319:787881:7904647904647914891026Synechococcus sp. CC9311, complete genomeMandelate racemase / muconate lactonizing enzyme, N-terminal domain protein6e-1685.5
NC_012623:2004786:2009055200905520101731119Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein8e-1685.1
NC_007348:752692:7614247614247626141191Ralstonia eutropha JMP134 chromosome 2, complete sequenceMandelate racemase/muconate lactonizing enzyme2e-1584
NC_011894:6708970:6722559672255967237431185Methylobacterium nodulans ORS 2060, complete genomeMandelate racemase/muconate lactonizing protein3e-1583.2
NC_014839:12519:172471724718019773Pantoea sp. At-9b plasmid pPAT9B02, complete sequence1e-1481.6
NC_003888:3817000:3843523384352338446081086Streptomyces coelicolor A3(2), complete genomeracemase1e-1481.3
NC_008786:2573558:2577007257700725781161110Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein2e-1480.9
NC_016943:1314500:1348685134868513499951311Blastococcus saxobsidens DD2, complete genomemandelate racemase8e-1375.1
NC_015733:2720183:2742169274216927434821314Pseudomonas putida S16 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-1273.6
NC_012588:742000:7617737617737628851113Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-1272
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein7e-1272
NC_010676:2720068:2731170273117027323031134Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein2e-1170.9
NC_017082:6444522:6446279644627964473701092Bradyrhizobium sp. S23321, complete genomemandelate racemase7e-1168.6
NC_014841:131308:1493361493361504481113Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceMandelate racemase/muconate lactonizing protein1e-1068.2
NC_016642:1990684:2010756201075620119251170Pseudovibrio sp. FO-BEG1 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1065.9
NC_015968:3053565:3058766305876630599201155Enterobacter asburiae LF7a chromosome, complete genomeMandelate racemase/muconate lactonizing protein5e-1065.9
NC_015635:811500:8341248341248354251302Microlunatus phosphovorus NM-1, complete genomedehydratase9e-1065.1
NC_014315:2787089:2814909281490928160121104Nitrosococcus watsoni C-113 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-0964.7
NC_002678:6061448:6083376608337660845601185Mesorhizobium loti MAFF303099, complete genomechloromuconate cycloisomerase3e-0860.1
NC_007948:517893:5355515355515366451095Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme3e-0859.7
NC_003317:1719546:1746116174611617473931278Brucella melitensis 16M chromosome I, complete sequenceMANDELATE RACEMASE4e-0859.7
NC_015556:4118304:4141558414155841427121155Pseudomonas fulva 12-X chromosome, complete genomeMandelate racemase/muconate lactonizing protein6e-0755.8