Pre_GI: BLASTP Hits

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Query: NC_011898:3658372:3665762 Clostridium cellulolyticum H10, complete genome

Start: 3665762, End: 3666004, Length: 243

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016791:1620858:163295316329531633195243Clostridium sp. BNL1100 chromosome, complete genomeAbrB family DNA-binding protein2e-35147
NC_016884:157894:179380179380179628249Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeAbrB family transcriptional regulator2e-23107
NC_015437:572788:591115591115591369255Selenomonas sputigena ATCC 35185 chromosome, complete genometranscriptional regulator, AbrB family3e-22103
NC_014831:65408:836688366883919252Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, AbrB family4e-21100
NC_016012:16134:613746137461616243Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeAbrB family transcriptional regulator3e-21100
NC_006177:3457637:347340134734013473670270Symbiobacterium thermophilum IAM 14863, complete genomesporulation-related transcriptional regulator AbrB2e-21100
NC_014393:4323368:433762243376224337870249Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, AbrB family6e-2199.4
NC_015913:35837:585095850958751243Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeAbrB family transcriptional regulator2e-2097.8
NC_009495:2479465:251200425120042512243240Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeSpoVT/AbrB family regulatory protein2e-1994.4
NC_010674:2011403:202279820227982023052255Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein5e-1992.8
NC_012563:2597934:260159226015922601831240Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, AbrB family1e-1892
NC_019978:2293327:230980223098022310059258Halobacteroides halobius DSM 5150, complete genomelooped-hinge helix DNA binding domain, AbrB family6e-1889.4
NC_017167:2259413:226316022631602263411252Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1AbrB family transcriptional regulator4e-1580.1
NC_016935:6464201:648721264872126487505294Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-1579.7
NC_017167:1648913:165478916547891655040252Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1AbrB family transcriptional regulator9e-1579
NC_014483:4957315:496281649628164963265450Paenibacillus polymyxa E681 chromosome, complete genomeRegulators of stationary/sporulation gene expression2e-1477.4
NC_016641:1085862:108996510899651090414450Paenibacillus terrae HPL-003 chromosome, complete genomeregulators of stationary/sporulation gene expression3e-1477
NC_016935:1636278:164911716491171649395279Paenibacillus mucilaginosus 3016 chromosome, complete genomeAbrB family transcriptional regulator1e-1375.1
NC_010381:92000:100641100641100967327Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequencetransition state regulatory protein1e-1374.7
NC_014622:5315500:532113953211395321588450Paenibacillus polymyxa SC2 chromosome, complete genometransition state transcriptional regulatory protein abrb2e-1374.7
NC_020291:117983:122958122958123509552Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomestage V sporulation protein T4e-1373.6
NC_010516:3845942:385167338516733852224552Clostridium botulinum B1 str. Okra, complete genomestage V sporulation protein T7e-1372.8
NC_004193:35698:448064480645081276Oceanobacillus iheyensis HTE831, complete genometranscriptional pleiotropic regulator of transition state genes6e-1372.8
NC_009698:3647955:365376536537653654316552Clostridium botulinum A str. Hall chromosome, complete genomestage V sporulation protein T7e-1372.4
NC_009697:3753527:375665537566553757206552Clostridium botulinum A str. ATCC 19397 chromosome, completestage V sporulation protein T7e-1372.4
NC_017297:3878540:388166838816683882219552Clostridium botulinum F str. 230613 chromosome, complete genomestage V sporulation protein T7e-1372.4
NC_014219:2253023:226899422689942269278285Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, AbrB family9e-1372.4
NC_014483:39729:469584695847500543Paenibacillus polymyxa E681 chromosome, complete genomeStage V sporulation protein T2e-1271.2
NC_016641:1639356:164550816455081646050543Paenibacillus terrae HPL-003 chromosome, complete genomestage V sporulation protein T2e-1271.2
NC_009633:168266:180682180682181233552Alkaliphilus metalliredigens QYMF chromosome, complete genomeAbrB family transcriptional regulator3e-1270.5
NC_013205:1187812:124280912428091243057249Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, AbrB family4e-1270.1
NC_009922:2850320:286475428647542865302549Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, AbrB family6e-1269.7
NC_019978:91483:108457108457109011555Halobacteroides halobius DSM 5150, complete genomestage V sporulation protein T9e-1268.9
NC_014152:191200:191200191200191763564Thermincola sp. JR, complete genometranscriptional regulator, AbrB family1e-1168.6
NC_011899:2286884:230691623069162307473558Halothermothrix orenii H 168, complete genometranscriptional regulator, AbrB family2e-1167.8
NC_004722:1804788:183129818312981831579282Bacillus cereus ATCC 14579, complete genomeTranscription state regulatory protein abrB4e-1167
NC_016641:2894899:290351429035142903960447Paenibacillus terrae HPL-003 chromosome, complete genometransition state transcriptional regulatory protein abrb1e-1065.5
NC_016641:2394628:240233524023352402616282Paenibacillus terrae HPL-003 chromosome, complete genomeregulators of stationary/sporulation gene expression2e-1064.7
NC_017208:1831918:186233218623321862613282Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscription state transcriptional regulator AbrB3e-1063.9
NC_016641:1369424:138453713845371384785249Paenibacillus terrae HPL-003 chromosome, complete genomespovt/abrb1e-0858.5
NC_016641:2894899:290402829040282904291264Paenibacillus terrae HPL-003 chromosome, complete genomeregulators of stationary/sporulation gene expression2e-0754.7
NC_016641:2394628:240160524016052402048444Paenibacillus terrae HPL-003 chromosome, complete genomeregulators of stationary/sporulation gene expression6e-0752.8