Pre_GI: BLASTP Hits

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Query: NC_011742:2823000:2829337 Escherichia coli S88 chromosome, complete genome

Start: 2829337, End: 2829969, Length: 633

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:2896254:289974528997452900377633Salmonella enterica subsp. enterica serovar Typhimurium strphage repressor protein cI9e-72269
NC_011147:2676972:268936826893682690000633Salmonella enterica subsp. enterica serovar Paratyphi A strphage repressor protein cI9e-72269
NC_003198:4453457:450560945056094506241633Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage repressor protein cI9e-72269
NC_003197:2870268:287617928761792876811633Salmonella typhimurium LT2, complete genomehypothetical protein9e-72269
NC_006511:2677964:269383226938322694464633Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage repressor protein cI9e-72269
NC_016857:2871689:288686328868632887495633Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage repressor protein cI1e-59229
NC_013282:3389619:340505834050583405672615Cronobacter turicensis, complete genomePutative uncharacterized protein ORFI in retron EC675e-58223
NC_016810:2871689:288692028869202887495576Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage repressor protein cI3e-53207
NC_009436:1466580:147758714775871478183597Enterobacter sp. 638, complete genomebacteriophage CI repressor4e-42171
NC_012947:2898179:290790729079072908476570Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeCI repressor6e-40164
NC_007613:761234:763483763483764052570Shigella boydii Sb227, complete genomerepressor protein6e-40164
NC_020260:312805:318993318993319607615Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-39161
NC_014837:3766426:378197237819723782577606Pantoea sp. At-9b chromosome, complete genomeCI repressor3e-37154
NC_011205:2938356:295459429545942954998405Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage repressor protein cI5e-37154
NC_011601:846358:855128855128856051924Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-36150
NC_011601:846358:856102856102856671570Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein1e-35149
NC_020181:5182568:519547351954735196063591Enterobacter aerogenes EA1509E, complete genomeCI9e-35146
NC_014306:1244721:124907312490731249669597Erwinia billingiae Eb661, complete genomeBacteriophage CI repressor6e-34144
NC_014500:894136:9188619188619200541194Dickeya dadantii 3937 chromosome, complete genomeRepressor protein CI5e-34144
NC_013592:804288:821538821538822101564Dickeya dadantii Ech586, complete genomeCI repressor5e-34144
NC_015061:2770856:277962827796282780188561Rahnella sp. Y9602 chromosome, complete genomeCI repressor2e-31135
NC_016845:4046142:405102140510214051617597Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,CI repressor2e-30132
NC_014837:2458780:246975224697522470630879Pantoea sp. At-9b chromosome, complete genomeCI repressor4e-30131
NC_012917:3565268:357597535759753576832858Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeCI repressor1e-27122
NC_006155:2116834:212296221229622123573612Yersinia pseudotuberculosis IP 32953, complete genomeCI repressor of phage 186 and others2e-25115
NC_009648:3803622:383337538333753833950576Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage repressor protein CI6e-23107
NC_009436:3807420:381287738128773813464588Enterobacter sp. 638, complete genomebacteriophage CI repressor1e-22106
NC_015061:596247:611561611561612151591Rahnella sp. Y9602 chromosome, complete genomeCI repressor3e-22105
NC_010694:614985:629291629291629869579Erwinia tasmaniensis, complete genomeBacteriophage 186 repressor protein CI8e-2097.1
NC_020211:4598217:461422846142284614686459Serratia marcescens WW4, complete genomephage transcriptional regulator1e-1789.7
NC_009784:253852:266342266342266968627Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein9e-1683.6
NC_012912:1701231:174072917407291741118390Dickeya zeae Ech1591, complete genome5e-1270.9
NC_013956:3525711:354353435435343543806273Pantoea ananatis LMG 20103 chromosome, complete genomeCI3e-0858.5
NC_010334:1561691:159000615900061590695690Shewanella halifaxensis HAW-EB4, complete genomeCI repressor5e-0754.3
NC_012125:894955:920537920537920893357Salmonella enterica subsp. enterica serovar Paratyphi C strainrepressor protein6e-0650.8