Pre_GI: BLASTP Hits

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Query: NC_011660:2924397:2942251 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 2942251, End: 2942793, Length: 543

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003212:57061:930909309093632543Listeria innocua Clip11262, complete genomehypothetical protein3e-98357
NC_014554:2159782:216735321673532167880528Lactobacillus plantarum subsp. plantarum ST-III chromosome,terminase small subunit6e-31133
NC_008530:646207:656005656005656526522Lactobacillus gasseri ATCC 33323, complete genomePhage terminase, small subunit3e-24111
NC_014136:1879049:189687818968781897393516Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage Lp2 protein 349e-23106
NC_008526:1924761:192873019287301929302573Lactobacillus casei ATCC 334, complete genomePhage terminase, small subunit1e-22105
NC_002662:30922:362713627136714444Lactococcus lactis subsp. lactis Il1403, complete genometerminase subunit9e-22103
NC_009004:2207148:221295722129572213397441Lactococcus lactis subsp. cremoris MG1363, complete genomeputative Terminase small subunit4e-22103
NC_009674:2985878:300791230079123008343432Bacillus cytotoxicus NVH 391-98 chromosome, complete genometerminase small subunit9e-22102
NC_013198:1095591:112294711229471123480534Lactobacillus rhamnosus GG, complete genomephage protein, terminase small subunit2e-21102
NC_008527:2112137:211706521170652117508444Lactococcus lactis subsp. cremoris SK11, complete genomePhage terminase, small subunit5e-21100
NC_013517:1480368:149955014995501499990441Sebaldella termitidis ATCC 33386, complete genomeTerminase small subunit3e-2097.8
NC_006582:2944237:297283729728372973274438Bacillus clausii KSM-K16, complete genometerminase small subunit G1p4e-2097.4
NC_012658:1810640:182776818277681828202435Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage terminase small subunit3e-1994.7
NC_014633:99744:123117123117123557441Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceterminase small subunit3e-1994.7
NC_008261:1099982:110122611012261101693468Clostridium perfringens ATCC 13124, complete genomephage terminase, small subunit4e-1994.4
NC_015425:1295261:130928913092891309750462Clostridium botulinum BKT015925 chromosome, complete genomephage terminase family protein4e-1994.4
NC_009332:1050353:105457610545761055028453Streptococcus pyogenes str. Manfredo chromosome, complete genomephage terminase small subunit6e-1683.6
NC_004606:446427:461064461064461516453Streptococcus pyogenes SSI-1, complete genometerminase small subunit (g1p)6e-1683.6
NC_012471:2080902:208922120892212089673453Streptococcus equi subsp. equi 4047, complete genomephage terminase, small subunit6e-1683.6
NC_004070:1431146:143536914353691435800432Streptococcus pyogenes MGAS315, complete genomeputative terminase small subunit - phage associated7e-1683.6
NC_008021:1401249:140406414040641404558495Streptococcus pyogenes MGAS9429, complete genomephage terminase small subunit9e-1683.2
NC_007297:1406796:140961114096111410105495Streptococcus pyogenes MGAS5005, complete genomephage terminase small subunit9e-1683.2
NC_008023:1426687:142795414279541428448495Streptococcus pyogenes MGAS2096, complete genomephage terminase small subunit9e-1683.2
NC_006086:35599:501945019450688495Streptococcus pyogenes MGAS10394, complete genomePhage Terminase Small Subunit9e-1683.2
NC_003210:2380419:238530123853012386095795Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-1580.9
NC_007503:1486000:150487215048721505324453Carboxydothermus hydrogenoformans Z-2901, complete genomeprophage LambdaCh01, terminase, small subunit1e-1375.9
NC_014498:1983740:201399920139992014478480Streptococcus pneumoniae 670-6B chromosome, complete genomephage terminase small subunit2e-1375.5
NC_012466:1754388:176855317685531769053501Streptococcus pneumoniae JJA, complete genomephage terminase small subunit4e-1374.3
NC_017294:115500:130164130164130586423Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeprophage LambdaCh01, terminase, small subunit9e-1373.2
NC_015913:117966:130854130854131276423Candidatus Arthromitus sp. SFB-mouse-Japan, complete genometerminase small subunit9e-1373.2
NC_011375:749693:764496764496764966471Streptococcus pyogenes NZ131 chromosome, complete genometerminase small subunit9e-1373.2
NC_017294:403422:408206408206408628423Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeprophage LambdaCh01, terminase, small subunit2e-1272
NC_007795:1922000:195004619500461950486441Staphylococcus aureus subsp. aureus NCTC 8325, complete genometerminase small subunit, putative1e-1169.7
NC_009641:1105075:111548911154891115929441Staphylococcus aureus subsp. aureus str. Newman chromosome,phage terminase small subunit1e-1169.7
NC_009641:1979053:200619920061992006639441Staphylococcus aureus subsp. aureus str. Newman chromosome,phage terminase small subunit1e-1169.7
NC_017351:643674:659973659973660413441Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeterminase small subunit1e-1169.7
NC_009782:920272:934955934955935395441Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein1e-1168.9
NC_002758:918827:933511933511933951441Staphylococcus aureus subsp. aureus Mu50, complete genomesmall terminase1e-1168.9
NC_015516:1467136:149075114907511491260510Melissococcus plutonius ATCC 35311, complete genomephage terminase small subunit2e-1168.6
NC_017068:2661419:268244226824422682813372Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage terminase1e-0962.8
NC_014724:1101950:111529911152991115868570Lactobacillus amylovorus GRL 1112 chromosome, complete genomeprophage Lp2 protein 341e-0962.4
NC_011898:3567761:359745235974523597964513Clostridium cellulolyticum H10, complete genomeTerminase small subunit2e-0962
NC_011898:3824000:384587738458773846389513Clostridium cellulolyticum H10, complete genomeTerminase small subunit2e-0962
NC_009012:2927793:294521629452162945665450Clostridium thermocellum ATCC 27405, complete genomeTerminase small subunit2e-0961.6
NC_020063:2565605:257026725702672570545279Enterobacteriaceae bacterium strain FGI 57, complete genomephage terminase, small subunit4e-0960.8
NC_012967:786534:791455791455792006552Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-0858.5
NC_017347:2119000:212382921238292124398570Staphylococcus aureus subsp. aureus T0131 chromosome, completeterminase9e-0856.6
NC_009699:2552195:255219525521952552782588Clostridium botulinum F str. Langeland chromosome, complete genomephage terminase small subunit1e-0756.2
NC_017297:2531750:255233525523352552922588Clostridium botulinum F str. 230613 chromosome, complete genomeputative phage terminase, small subunit1e-0756.2
NC_017341:903473:915979915979916548570Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,bacteriophage terminase small subunit1e-0756.2
NC_009487:921884:936766936766937260495Staphylococcus aureus subsp. aureus JH9 chromosome, completeterminase small subunit3e-0755.1
NC_009632:921759:936566936566937135570Staphylococcus aureus subsp. aureus JH1 chromosome, completeterminase small subunit4e-0754.3
NC_013956:1207500:121270112127011212934234Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0652.4
NC_007622:1842000:187082018708201871329510Staphylococcus aureus RF122, complete genomehypothetical mobile-element-associated protein2e-0652
NC_020134:420500:432110432110432376267Clostridium stercorarium subsp. stercorarium DSM 8532, completeterminase small subunit5e-0650.8