Pre_GI: BLASTP Hits

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Query: NC_011205:609464:629058 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 629058, End: 629891, Length: 834

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:374000:387358387358388173816Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA replication protein gp184e-124444
NC_016860:364981:380860380860381681822Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage replication protein O1e-94345
NC_013361:3287671:329336032933603294181822Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein4e-93341
NC_013282:1200993:121593612159361216832897Cronobacter turicensis, complete genomeDNA replication protein gp181e-73276
NC_020418:3133831:313626531362653137101837Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-67254
NC_011601:2614691:261763726176372618584948Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein9e-60230
NC_007946:2625461:262807226280722628959888Escherichia coli UTI89, complete genomehypothetical protein9e-60230
NC_011740:2072173:210811821081182109065948Escherichia fergusonii ATCC 35469, complete genomehypothetical protein6e-59227
NC_011353:2957962:2973250297325029742541005Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage replication protein O6e-38157
NC_013941:699286:7055757055757065941020Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage replication protein O6e-38157
NC_013008:2910567:2928121292812129291401020Escherichia coli O157:H7 str. TW14359 chromosome, complete genomereplication protein O6e-38157
NC_011415:600375:618276618276619205930Escherichia coli SE11 chromosome, complete genomeputative phage replication protein1e-37157
NC_011751:643976:6532266532266542451020Escherichia coli UMN026 chromosome, complete genomereplication protein O frm phage origin1e-37156
NC_011740:2769961:2784994278499427860131020Escherichia fergusonii ATCC 35469, complete genomeReplication protein O frm phage origin2e-37156
NC_011080:2761403:276818727681872769071885Salmonella enterica subsp. enterica serovar Newport str. SL254,replication protein O6e-37154
NC_016856:2812905:281968928196892820573885Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage replication protein O6e-37154
NC_017046:2756000:276522027652202766104885Salmonella enterica subsp. enterica serovar Typhimurium str. 798Gifsy-2 replication Protein O6e-37154
NC_011283:4212000:421922242192224220076855Klebsiella pneumoniae 342 chromosome, complete genomephage replication protein O2e-36152
CU928145:824367:8289848289848300031020Escherichia coli 55989 chromosome, complete genomeReplication protein O frm phage origin6e-36151
NC_011748:824367:8289848289848300031020Escherichia coli 55989, complete genomeReplication protein O frm phage origin6e-36151
NC_012779:1939747:195602319560231956961939Edwardsiella ictaluri 93-146, complete genomereplication of DNA1e-32140
NC_011094:593100:611187611187612047861Salmonella enterica subsp. enterica serovar Schwarzengrund strgp591e-29130
NC_014837:2354241:2355619235561923566831065Pantoea sp. At-9b chromosome, complete genomephage replication protein O1e-27123
NC_016816:1970189:1987156198715619882201065Pantoea ananatis LMG 5342, complete genomephage replication protein O2e-24112
NC_006905:368942:384386384386385234849Salmonella enterica subsp. enterica serovar Choleraesuis strreplication protein O1e-23110
NC_013941:3300000:330100833010083301946939Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage replication protein O1e-21103
NC_013361:3112023:312820231282023129140939Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein1e-21103
AP010958:5361207:537837553783755379313939Escherichia coli O103:H2 str. 12009 DNA, complete genomereplication protein1e-21103
NC_002655:1332961:134438413443841345322939Escherichia coli O157:H7 EDL933, complete genomeputative replication protein O of bacteriophage BP-933W1e-21103
NC_013353:5361207:537837553783755379313939Escherichia coli O103:H2 str. 12009, complete genomereplication protein1e-21103
NC_013361:1558423:157197515719751572913939Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein1e-21103
NC_013364:1183000:119564111956411196579939Escherichia coli O111:H- str. 11128, complete genomeputative replication protein1e-21103
NC_011353:3276734:328012532801253281063939Escherichia coli O157:H7 str. EC4115 chromosome, complete genomereplication protein O1e-21103
NC_013008:3231414:323499632349963235934939Escherichia coli O157:H7 str. TW14359 chromosome, complete genomereplication protein O1e-21103
NC_011751:1405381:142064614206461421545900Escherichia coli UMN026 chromosome, complete genomereplication protein from bacteriophage origin5e-21101
NC_011601:1039500:105322710532271054126900Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein5e-21101
NC_012759:4132527:414428741442874145186900Escherichia coli BW2952 chromosome, complete genomeReplication protein O5e-21101
NC_012947:3015985:302002130200213020920900Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephage replication protein O5e-21101
NC_013941:975353:990688990688991587900Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-21101
NC_007946:1239278:125173912517391252638900Escherichia coli UTI89, complete genomeputative replication protein O of bacteriophage5e-21101
NC_008563:1175035:118912611891261190025900Escherichia coli APEC O1, complete genomeputative replication protein O of bacteriophage5e-21101
NC_004431:1401681:141389114138911414790900Escherichia coli CFT073, complete genomePutative replication protein O of bacteriophage5e-21101
NC_002655:301940:303399303399304007609Escherichia coli O157:H7 EDL933, complete genomepartial O replication protein for prophage CP-933H2e-2099.8
NC_011742:1177946:119271511927151193179465Escherichia coli S88 chromosome, complete genome2e-2099.8
NC_017986:4885979:490779249077924908613822Pseudomonas putida ND6 chromosome, complete genomephage replication protein5e-1788.2
NC_007645:605500:606779606779607768990Hahella chejuensis KCTC 2396, complete genomephage replication protein O2e-1272.8
NC_007712:1893066:190209219020921902865774Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-1170.1
NC_016809:389561:392072392072392899828Haemophilus influenzae 10810, complete genomehypothetical protein1e-0963.9
NC_009708:2537557:2552641255264125536841044Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-0963.2
NC_016514:2476359:251218525121852513135951Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YfdO3e-0962.8
NC_011415:2277559:2300210230021023012741065Escherichia coli SE11 chromosome, complete genomehypothetical protein8e-0961.2
NC_009801:2193000:2213785221378522148491065Escherichia coli E24377A, complete genomehypothetical protein8e-0961.2
NC_020063:2565605:258198225819822582881900Enterobacteriaceae bacterium strain FGI 57, complete genomephage replication protein O1e-0757.4
NC_012914:1851102:186961518696151870499885Paenibacillus sp. JDR-2, complete genomehypothetical protein1e-0654.3
NC_012751:942315:978497978497979402906Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage replication protein1e-0653.9
NC_014121:3627588:366881636688163669715900Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeDNA replication protein gp186e-0651.6