Pre_GI: BLASTP Hits

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Query: NC_011147:2536000:2541349 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2541349, End: 2542068, Length: 720

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:2540500:254581325458132546532720Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible outer membrane adhesin2e-137488
NC_011080:333121:354407354407355126720Salmonella enterica subsp. enterica serovar Newport str. SL254,putative outer membrane adhesin5e-137486
NC_003197:332086:349893349893350612720Salmonella typhimurium LT2, complete genomeSapA-like protein1e-136485
NC_011083:338910:357912357912358631720Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-136485
NC_011294:311796:329433329433330152720Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane adhesin1e-136485
NC_016810:329849:349371349371350090720Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane adhesin1e-136485
NC_016831:2667561:267378826737882674507720Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative outer membrane adhesin1e-136485
NC_016856:332771:350578350578351297720Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SSapA-like protein1e-136485
NC_016857:329849:349371349371350090720Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74SapA-like protein1e-136485
NC_016860:332087:349894349894350613720Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane adhesin1e-136485
NC_016863:332060:349867349867350586720Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1SapA-like protein1e-136485
NC_017046:329847:349369349369350088720Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane adhesin1e-136485
NC_012125:326909:344411344411345130720Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane adhesin2e-136484
NC_004631:2615908:262108826210882621807720Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible outer membrane adhesin6e-136483
NC_016832:2612809:261798926179892618708720Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,outer membrane adhesin6e-136483
NC_010102:2762304:276668727666872767406720Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-135481
NC_011149:309556:332595332595333254660Salmonella enterica subsp. enterica serovar Agona str. SL483,putative outer membrane adhesin9e-116416
NC_007946:4779745:478540147854014786156756Escherichia coli UTI89, complete genomeadhesin/virulence factor Hek5e-36151
NC_008253:4735418:474243047424304743170741Escherichia coli 536, complete genomeOmpA family protein6e-36150
CP002797:4775780:478279247827924783538747Escherichia coli NA114, complete genomePutative peptide transport periplasmic protein2e-35149
NC_011750:4775770:479414647941464794901756Escherichia coli IAI39 chromosome, complete genomeTia invasion determinant2e-32139
NC_016629:3789554:382378138237813824482702Desulfovibrio africanus str. Walvis Bay chromosome, completeopacity type porin4e-21101
NC_006300:1140635:114545611454561146136681Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein8e-0857.4
NC_015947:2360592:237299923729992373685687Burkholderia sp. JV3 chromosome, complete genomeopacity protein and surface antigens-like protein3e-0755.5
NC_009668:1726000:173853217385321739218687Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceporin4e-0755.1
NC_010515:1124298:115221311522131152929717Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceporin opacity type6e-0754.7
NC_015857:963570:967315967315968025711Brucella pinnipedialis B2/94 chromosome chromosome 1, complete5e-0754.7
NC_003317:1030220:104606710460671046777711Brucella melitensis 16M chromosome I, complete sequence25 KDA OUTER-MEMBRANE IMMUNOGENIC PROTEIN PRECURSOR8e-0754.3
NC_004310:937800:941546941546942256711Brucella suis 1330 chromosome I, complete sequenceouter membrane protein, putative8e-0754.3
NC_010169:957565:961311961311962021711Brucella suis ATCC 23445 chromosome I, complete sequence22 kDa outer membrane protein precursor8e-0754.3
NC_012441:956609:960341960341961051711Brucella melitensis ATCC 23457 chromosome I, complete sequenceporin8e-0754.3
NC_013119:942079:945825945825946535711Brucella microti CCM 4915 chromosome 1, complete sequenceouter membrane protein, putative8e-0754.3
NC_016797:937753:941499941499942209711Brucella suis VBI22 chromosome I, complete sequenceouter membrane protein8e-0754.3
NC_017244:956554:960285960285960995711Brucella melitensis M28 chromosome chromosome 1, complete sequenceporin8e-0754.3
NC_017251:937786:941532941532942242711Brucella suis 1330 chromosome I, complete genomeouter membrane protein8e-0754.3
NC_017246:956868:960587960587961309723Brucella melitensis M5-90 chromosome chromosome I, completeporin8e-0754.3
NC_017248:953131:956841956841957572732Brucella melitensis NI chromosome chromosome I, complete sequenceporin7e-0754.3
NC_007618:955000:957924957924958379456Brucella melitensis biovar Abortus 2308 chromosome I, complete1e-0653.9
NC_009727:357206:374133374133374678546Coxiella burnetii Dugway 7E9-12, complete genomeopacity family porin protein1e-0653.5
NC_010117:1633447:163344716334471633992546Coxiella burnetii RSA 331, complete genomeopacity family porin protein1e-0653.1
NC_002971:1545924:154606515460651546610546Coxiella burnetii RSA 493, complete genomehypothetical protein1e-0653.1