Pre_GI: BLASTP Hits

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Query: NC_011147:1057259:1072454 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 1072454, End: 1074433, Length: 1980

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:1063249:1078444107844410804231980Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative hydrolase01319
NC_016832:1090274:1094882109488210968611980Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein01313
NC_003198:1867456:1883242188324218852211980Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative hydrolase01313
NC_004631:1091303:1095911109591110978901980Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative hydrolase01313
NC_011294:1220526:1228217122821712301961980Salmonella enterica subsp. enterica serovar Enteritidis strphage encoded hydrolase01312
NC_006905:1961774:1978287197828719802661980Salmonella enterica subsp. enterica serovar Choleraesuis strputative hydrolase01311
NC_012125:1897611:1912472191247219144391968Salmonella enterica subsp. enterica serovar Paratyphi C strainhydrolase01307
NC_016831:1734292:1747552174755217495191968Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage encoded hydrolase01304
NC_011205:1345511:1364141136414113661081968Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853alkyl/aryl-sulfatase BDS101304
NC_020063:2343813:2345752234575223477281977Enterobacteriaceae bacterium strain FGI 57, complete genomealkyl sulfatase-like hydrolase01220
NC_014618:3700640:3700640370064037025741935Enterobacter cloacae SCF1 chromosome, complete genomebeta-lactamase domain-containing protein01191
NC_016818:3114460:3124109312410931260881980Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completealkyl sulfatase-like hydrolase01177
NC_020063:2343813:2351236235123623532181983Enterobacteriaceae bacterium strain FGI 57, complete genomealkyl sulfatase-like hydrolase01101
NC_012731:3593000:3601725360172536037011977Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative hydrolase01059
NC_013517:2437574:2439672243967224416391968Sebaldella termitidis ATCC 33386, complete genomebeta-lactamase domain protein0706
NC_016626:1699500:1730390173039017323871998Burkholderia sp. YI23 plasmid byi_1p, complete sequencebeta-lactamase1e-180633
NC_018691:4619245:4637412463741246393221911Alcanivorax dieselolei B5 chromosome, complete genomebeta-lactamase-like protein2e-179629
NC_016626:1781956:1811545181154518135992055Burkholderia sp. YI23 plasmid byi_1p, complete sequencebeta-lactamase6e-178624
NC_009801:4643000:4643130464313046451151986Escherichia coli E24377A, complete genomemetallo-beta-lactamase superfamily protein4e-176618
CP002185:4566150:4569735456973545717201986Escherichia coli W, complete genomepredicted alkyl sulfatase4e-176618
CU928145:4695932:4695932469593246979171986Escherichia coli 55989 chromosome, complete genomeputative alkyl sulfatase4e-176618
NC_011748:4695932:4695932469593246979171986Escherichia coli 55989, complete genomeputative alkyl sulfatase4e-176618
NC_011751:4795928:4797462479746247994471986Escherichia coli UMN026 chromosome, complete genomeputative alkyl sulfatase8e-176617
NC_011741:4395156:4395156439515643971411986Escherichia coli IAI1 chromosome, complete genomeputative alkyl sulfatase1e-175617
CU928160:4395156:4395156439515643971411986Escherichia coli IAI1 chromosome, complete genomeputative alkyl sulfatase1e-175617
NC_009800:4332229:4335814433581443377991986Escherichia coli HS, complete genomemetallo-beta-lactamase superfamily protein1e-173610
NC_013364:5040268:5043853504385350458381986Escherichia coli O111:H- str. 11128, complete genomeputative alkyl sulfatase1e-173610
NC_007384:4530000:4530044453004445320411998Shigella sonnei Ss046, complete genomehypothetical protein4e-173608
NC_016822:4686971:4686971468697146889561986Shigella sonnei 53G, complete genomehypothetical protein5e-173608
NC_012731:3593000:359988335998833600818936Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative hydrolase9e-173607
NC_007613:4156841:4160426416042641624231998Shigella boydii Sb227, complete genomehypothetical protein3e-171602
NC_017506:4380196:4380196438019643818241629Marinobacter adhaerens HP15 chromosome, complete genomemetallo-beta-lactamase superfamily protein2e-163576
NC_010506:5155951:5170218517021851723082091Shewanella woodyi ATCC 51908, complete genomebeta-lactamase domain protein1e-151537
NC_014153:1663597:1678083167808316799961914Thiomonas intermedia K12 chromosome, complete genomebeta-lactamase domain-containing protein9e-147521
NC_007492:2629350:2630141263014126321081968Pseudomonas fluorescens PfO-1, complete genomeBeta-lactamase-like3e-136486
NC_013131:7889127:7891121789112178929441824Catenulispora acidiphila DSM 44928, complete genomebeta-lactamase domain protein4e-135482
NC_015589:366296:3836553836553849351281Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebeta-lactamase domain-containing protein8e-40165
NC_007761:1097531:1112240111224011135561317Rhizobium etli CFN 42, complete genomeputative alkyl sulfatase beta-lactamase family protein3e-35150
NC_015731:2039317:2064480206448020657871308Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein2e-1997.8
NC_002944:292974:3064713064713076671197Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-0965.1
NC_008595:312861:3280783280783293161239Mycobacterium avium 104, complete genomemetallo-beta-lactamase superfamily protein4e-0963.9
NC_020133:5965500:598654359865435987232690Mycobacterium liflandii 128FXT, complete genome1e-0758.9