Pre_GI: BLASTP Hits

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Query: NC_011094:638552:667212 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 667212, End: 667709, Length: 498

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017060:59500:906009060091109510Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein6e-57219
NC_013361:2138716:214451321445132145040528Escherichia coli O26:H11 str. 11368 chromosome, complete genometerminase small subunit3e-42171
NC_009800:1657550:166508916650891665616528Escherichia coli HS, complete genomehypothetical protein3e-42171
NC_007712:2028500:207731120773112077850540Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-36151
NC_010102:1137247:115313311531331153624492Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-26117
NC_010067:2304313:232324923232492323740492Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-26116
NC_011094:1923870:194223519422351942726492Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-26115
NC_002695:2893951:291820729182072918683477Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-24111
NC_011353:2892265:291239229123922912868477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage terminase, small subunit2e-24111
NC_013008:2910567:291268729126872913163477Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-24111
NC_011294:1220526:124922912492291249720492Salmonella enterica subsp. enterica serovar Enteritidis strphage terminase small subunit2e-24111
NC_016831:1690811:171102117110211711512492Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage terminase, small subunit1e-23108
NC_011274:1299475:131340413134041313895492Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage terminase small subunit4e-23107
NC_011353:2957962:295796229579622958438477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage terminase, small subunit6e-23106
NC_008563:5011997:502446450244645024955492Escherichia coli APEC O1, complete genomehypothetical protein2e-1685.1
NC_011740:4520373:453194245319424532433492Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from putative prophage2e-1685.1
NC_011742:4962008:497447449744744974965492Escherichia coli S88 chromosome, complete genomehypothetical protein2e-1685.1
NC_011748:1773642:177984317798431780337495Escherichia coli 55989, complete genomeconserved hypothetical protein from putative prophage2e-1684.7
NC_011751:1859606:186539718653971865891495Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-1684.7
CU928145:1773642:177984317798431780337495Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein from putative prophage2e-1684.7
NC_011740:2769961:277381427738142774332519Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin5e-1580.1
NC_011205:1345511:137294613729461373479534Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gifsy-2 prophage protein4e-1477.4
NC_016831:1734292:174013917401391740672534Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1477.4
NC_014121:1682638:170066017006601701160501Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-1373.9
NC_016612:3314846:333954133395413340032492Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein5e-1373.6
NC_017047:1906000:192064919206491921137489Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein3e-1270.9
NC_009053:553298:575285575285575704420Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein4e-0857.4
NC_011294:1220526:123707612370761237387312Salmonella enterica subsp. enterica serovar Enteritidis str2e-0652