Pre_GI: BLASTP Hits

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Query: NC_011035:1974489:1994375 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 1994375, End: 1995685, Length: 1311

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017511:1883663:1902873190287319042101338Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein0850
NC_003112:96815:1166241166241179551332Neisseria meningitidis MC58, complete genomehypothetical protein0768
NC_017518:98639:1176131176131188301218Neisseria meningitidis NZ-05/33 chromosome, complete genomeLysM domain-containing protein0714
NC_017505:96293:1152661152661164831218Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein0714
NC_008767:84950:1046011046011058181218Neisseria meningitidis FAM18, complete genomeputative periplasmic protein (possibly peptidoglycan-binding)0708
NC_017517:98554:1181251181251193421218Neisseria meningitidis M01-240355 chromosome, complete genomeLysM domain-containing protein0708
NC_017516:96879:1166881166881179051218Neisseria meningitidis H44/76 chromosome, complete genomeLysM domain-containing protein0708
NC_017501:96211:1149691149691161861218Neisseria meningitidis 8013, complete genomeputative peptidoglycan-binding periplasmic protein0708
NC_017515:76861:1226621226621238791218Neisseria meningitidis M04-240196 chromosome, complete genomeLysM domain-containing protein0706
NC_015422:4822636:4842117484211748433371221Alicycliphilus denitrificans K601 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein4e-40166
NC_015138:5276857:5296465529646552977181254Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completepeptidoglycan-binding lysin domain-containing protein2e-37157
NC_011992:3615517:3633237363323736344961260Acidovorax ebreus TPSY, complete genomePeptidoglycan-binding LysM4e-37155
NC_008752:5213431:5231287523128752325401254Acidovorax avenae subsp. citrulli AAC00-1, complete genomePeptidoglycan-binding LysM8e-37155
NC_008260:125500:1429941429941440671074Alcanivorax borkumensis SK2, complete genomeLysM domain protein1e-30134
NC_010611:208268:2094192094192105731155Acinetobacter baumannii ACICU, complete genomeuncharacterized protein containing LysM domain3e-1893.6
NC_010410:3719599:3739408373940837405621155Acinetobacter baumannii AYE, complete genomeconserved hypothetical protein; putative exported protein5e-1892.8
NC_017297:2531750:253784125378412538518678Clostridium botulinum F str. 230613 chromosome, complete genomelysM domain protein5e-0859.3
NC_009012:2953638:295937729593772960036660Clostridium thermocellum ATCC 27405, complete genomePeptidoglycan-binding LysM6e-0858.9
NC_020134:420500:445303445303446001699Clostridium stercorarium subsp. stercorarium DSM 8532, completepeptidoglycan-binding lysin domain-containing protein3e-0757