Pre_GI: BLASTP Hits

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Query: NC_011004:2507566:2529112 Rhodopseudomonas palustris TIE-1, complete genome

Start: 2529112, End: 2530383, Length: 1272

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007958:2370619:2400563240056324018341272Rhodopseudomonas palustris BisB5, complete genomeouter membrane efflux protein0658
NC_011004:2457778:2488205248820524894761272Rhodopseudomonas palustris TIE-1, complete genomeouter membrane efflux protein0652
NC_009485:7626677:7633328763332876346021275Bradyrhizobium sp. BTAi1 chromosome, complete genomeouter membrane cobalt-zinc-cadmium resistance protein czcC2e-127455
NC_009720:670853:6901676901676914831317Xanthobacter autotrophicus Py2, complete genomeouter membrane efflux protein1e-96353
NC_009720:4406991:4406991440699144082621272Xanthobacter autotrophicus Py2, complete genomeouter membrane efflux protein2e-93342
NC_015222:523915:5445795445795460061428Nitrosomonas sp. AL212 chromosome, complete genomeouter membrane efflux protein2e-38160
NC_009138:519965:5232805232805245691290Herminiimonas arsenicoxydans, complete genomedivalent cation efflux system periplasmic protein CzcC2e-34147
NC_009138:1583988:1587664158766415889621299Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcC precursor (Cation efflux system protein czcC)1e-34147
NC_012968:1594954:1626466162646616277311266Methylotenera mobilis JLW8, complete genomeouter membrane efflux protein4e-34146
NC_010002:1879220:1906105190610519074361332Delftia acidovorans SPH-1, complete genomeouter membrane efflux protein2e-33143
NC_009439:1297851:1323417132341713246671251Pseudomonas mendocina ymp, complete genomeouter membrane efflux protein8e-32138
NC_009434:3611738:3697189369718936984301242Pseudomonas stutzeri A1501, complete genomecobalt-zinc-cadmium resistance protein CzcC, putative4e-29129
NC_013446:2820000:2835724283572428370011278Comamonas testosteroni CNB-2, complete genomeouter membrane efflux protein4e-29129
NC_009512:27783:6269462694638781185Pseudomonas putida F1, complete genomeouter membrane efflux protein4e-29129
NC_002947:8394:5071850718519891272Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family4e-29129
NC_010501:30000:6741067410686811272Pseudomonas putida W619, complete genomeouter membrane efflux protein4e-29129
NC_010322:29983:6347663476647471272Pseudomonas putida GB-1 chromosome, complete genomeouter membrane efflux protein4e-29129
NC_017986:2548720:2596893259689325980771185Pseudomonas putida ND6 chromosome, complete genomeouter membrane efflux protein3e-29129
NC_008782:1917634:1928110192811019294651356Acidovorax sp. JS42, complete genomeouter membrane efflux protein6e-29128
NC_010170:4800000:4868326486832648696151290Bordetella petrii, complete genomemetal ion efflux outer membrane protein, putative1e-28127
NC_015740:1291739:1303598130359813048391242Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecobalt-zinc-cadmium resistance protein CzcC1e-28127
NC_014910:242845:2515782515782529031326Alicycliphilus denitrificans BC chromosome, complete genomeouter membrane efflux protein5e-28125
NC_009659:1984980:2003846200384620051351290Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium outer membrane resistance protein czcC1e-27124
NC_018868:619113:6410036410036423311329Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeouter membrane efflux protein7e-24112
NC_015422:3513689:3533957353395735352581302Alicycliphilus denitrificans K601 chromosome, complete genomeouter membrane efflux protein2e-23110
NC_008347:2515921:2533414253341425347001287Maricaulis maris MCS10, complete genomeouter membrane efflux protein1e-21104
NC_012982:711122:7591397591397604251287Hirschia baltica ATCC 49814, complete genomeouter membrane efflux protein1e-21104
NC_014323:5051041:5070673507067350719591287Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system outer membrane protein2e-21103
NC_010943:2465976:2486816248681624880931278Stenotrophomonas maltophilia K279a, complete genomeputative cobalt-zinc-cadmium resistance protein5e-21102
NC_008752:2724977:2740441274044127417511311Acidovorax avenae subsp. citrulli AAC00-1, complete genomeouter membrane efflux protein2e-20100
NC_009438:236424:2479862479862492301245Shewanella putrefaciens CN-32 chromosome, complete genomeouter membrane efflux protein4e-1892.8
NC_008345:4107847:4107847410784741091961350Shewanella frigidimarina NCIMB 400, complete genomeouter membrane efflux protein1e-1791.7
NC_007520:2305610:2320746232074623220531308Thiomicrospira crunogena XCL-2, complete genomeOuter membrane efflux protein3e-1789.7
NC_003296:612000:6124006124006137251326Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE COBALT-ZINC-CADMIUM OUTER MEMBRANE RESISTANCE PROTEIN8e-1788.6
NC_018697:1343756:1385862138586213871721311Cycloclasticus sp. P1 chromosome, complete genomeCobalt/zinc/cadmium efflux RND transporter,outermembrane protein1e-1687.8
NC_008347:2515921:2551320255132025526331314Maricaulis maris MCS10, complete genomeouter membrane efflux protein1e-1378.2
NC_018678:554675:5773025773025785851284Alteromonas macleodii str. 'English Channel 673' chromosome,cobalt-zinc-cadmium cation efflux system outer membrane protein, CzcC family1e-1377.8
NC_015554:1653614:1654996165499616564231428Alteromonas sp. SN2 chromosome, complete genomeouter membrane efflux protein1e-1377.8
NC_014366:588347:6006226006226018601239Gamma proteobacterium HdN1, complete genomepredicted outer membrane efflux protein4e-1272.8
NC_002939:2337402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative6e-1272.4
NC_002939:2315402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative6e-1272.4
NC_011146:2200142:2240273224027322415711299Geobacter bemidjiensis Bem, complete genomeouter membrane efflux protein6e-1169.3
NC_009659:1923925:1958319195831919596081290Janthinobacterium sp. Marseille chromosome, complete genomeouter membrane efflux protein1e-1068.2
NC_002977:2254440:2269135226913522704481314Methylococcus capsulatus str. Bath, complete genomeouter membrane efflux protein4e-0963.2
NC_016147:623666:6431416431416442591119Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeouter membrane efflux protein8e-0962
NC_020126:6264651:6264651626465162661171467Myxococcus stipitatus DSM 14675, complete genomecation efflux system protein CusC2e-0860.8
NC_015733:5909821:594451559445155945135621Pseudomonas putida S16 chromosome, complete genomeCzcC family cobalt/zinc/cadmium efflux transporter outer membrane protein3e-0860.1
NC_011138:318168:3343263343263355281203Alteromonas macleodii 'Deep ecotype', complete genomeOuter membrane efflux protein3e-0860.1
NC_015733:5955467:5955467595546759567591293Pseudomonas putida S16 chromosome, complete genomeCzcC family heavy metal RND efflux outer membrane protein1e-0758.2
NC_016609:5890292:5935933593593359372131281Niastella koreensis GR20-10 chromosome, complete genomeouter membrane efflux protein6e-0652.8