Pre_GI: BLASTP Hits

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Query: NC_010803:1436397:1454628 Chlorobium limicola DSM 245, complete genome

Start: 1454628, End: 1458308, Length: 3681

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008639:1573971:1592170159217015958353666Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, beta subunit01975
NC_004459:1794540:1790923179092317945433621Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse beta subunit9e-131468
NC_013361:3823347:3840997384099738445393543Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit beta1e-123445
NC_008253:2965573:2983115298311529866573543Escherichia coli 536, complete genomeexodeoxyribonuclease V beta chain1e-123445
NC_007613:2699500:2715195271519527187373543Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit2e-123444
NC_011745:3197584:3215233321523332187753543Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit beta3e-123443
NC_010498:3023442:3041092304109230446043513Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, beta subunit6e-123442
NC_011742:3057444:3074776307477630783183543Escherichia coli S88 chromosome, complete genomeexonuclease V subunit beta4e-122440
NC_007946:3125577:3142897314289731464483552Escherichia coli UTI89, complete genomeexodeoxyribonuclease V beta chain5e-122439
NC_010694:3055403:3055403305540330589393537Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V beta chain3e-117423
NC_007712:3382000:3401801340180134053433543Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V beta subunit6e-115416
NC_013889:1740858:1737139173713917408613723Thioalkalivibrio sp. K90mix chromosome, complete genomeexodeoxyribonuclease V, beta subunit8e-109395
NC_020209:3797830:3794159379415937978333675Pseudomonas poae RE*1-1-14, complete genomeexodeoxyribonuclease V subunit beta1e-106388
NC_002663:564958:5899775899775936693693Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecB6e-104379
NC_014500:2479814:2500330250033025040043675Dickeya dadantii 3937 chromosome, complete genomeexonuclease V (RecBCD complex), subunit beta3e-103377
NC_009053:393700:4160344160344196423609Actinobacillus pleuropneumoniae L20, complete genomeexodeoxyribonuclease V beta chain8e-102372
NC_010939:405477:4438164438164474243609Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeexodeoxyribonuclease V beta chain3e-101370
NC_010278:398521:4207614207614243693609Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,exodeoxyribonuclease V subunit beta7e-101369
NC_019940:2546500:2567719256771925713003582Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit beta5e-97356
NC_018691:3496420:3492807349280734964303624Alcanivorax dieselolei B5 chromosome, complete genomeExodeoxyribonuclease V, beta subunit1e-88328
NC_015740:3678342:3678342367834236820223681Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit beta3e-88327
NC_004061:498483:4984834984835020223540Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 135 kDa polypeptide5e-80300
NC_014924:3334386:3354099335409933577163618Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, beta subunit4e-77290
NC_018645:4945698:4953396495339649571633768Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit beta1e-76288
NC_012791:4794362:4820354482035448241453792Variovorax paradoxus S110 chromosome 1, complete genomeexodeoxyribonuclease V, beta subunit7e-72273
NC_013851:3478153:3489678348967834935323855Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, beta subunit7e-70266
NC_011206:2512667:2516056251605625196523597Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, beta subunit3e-68261
NC_017271:4852351:4873729487372948776823954Xanthomonas campestris pv. raphani 756C chromosome, completeexodeoxyribonuclease V subunit beta6e-64246
NC_007086:5064053:5081732508173250858504119Xanthomonas campestris pv. campestris str. 8004, complete genomeexodeoxyribonuclease V beta chain6e-63243
NC_003902:4989855:5009047500904750131654119Xanthomonas campestris pv. campestris str. ATCC 33913, completeexodeoxyribonuclease V beta chain7e-63243
NC_010688:4991410:5011365501136550154834119Xanthomonas campestris pv. campestris, complete genomeexodeoxyribonuclease V beta chain1e-62242
NC_008319:962968:9593339593339629713639Synechococcus sp. CC9311, complete genomeexodeoxyribonuclease V, beta subunit2e-49198
NC_009481:1365000:1381620138162013853093690Synechococcus sp. WH 7803 chromosome, complete genomeexodeoxyribonuclease V subunit beta6e-25117
NC_014365:2037506:2061168206116820646473480Desulfarculus baarsii DSM 2075 chromosome, complete genomeUvrD/REP helicase3e-1791.7
NC_009720:870194:8701948701948735173324Xanthobacter autotrophicus Py2, complete genomeUvrD/REP helicase7e-1687
NC_015732:30472:6948969489730223534Spirochaeta caldaria DSM 7334 chromosome, complete genomeUvrD/REP helicase8e-1687
NC_020388:1479568:1527842152784215316603819Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase1e-1380.1
NC_018581:2768743:2778553277855327818073255Gordonia sp. KTR9 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)4e-1378.2
NC_020453:7826358:7826358782635878296753318Agromonas oligotrophica S58 DNA, complete genomeUvrD/REP helicase2e-1275.9
NC_015578:2428500:2432809243280924359673159Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase3e-1275.1
NC_020210:2133996:2174276217427621763362061Geobacillus sp. GHH01, complete genomeDNA/RNA helicase2e-1172
NC_015738:978794:1043373104337310470443672Eggerthella sp. YY7918, complete genomeATP-dependent exoDNAse exonuclease V subunit beta3e-1171.6
NC_014973:243000:2582002582002603922193Geobacter sp. M18 chromosome, complete genomeUvrD/REP helicase4e-1171.6
NC_014926:795549:7955497955497984252877Thermovibrio ammonificans HB-1 chromosome, complete genomeUvrD/REP helicase4e-1171.2
NC_015161:927152:9336859336859359882304Deinococcus proteolyticus MRP chromosome, complete genomeUvrD/REP helicase4e-1171.2
NC_010725:3315007:3335885333588533390283144Methylobacterium populi BJ001, complete genomeUvrD/REP helicase6e-1170.9
NC_011297:1224749:1231122123112212329991878Dictyoglomus thermophilum H-6-12, complete genomeATP-dependent DNA helicase PcrA1e-1070.1
NC_019815:761480:7794157794157827743360Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiUvrD/Rep helicase family protein 21e-1069.7
NC_007645:713930:7350657350657372302166Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase2e-1068.9
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase4e-1067.8
NC_008767:1363288:1380391138039113824632073Neisseria meningitidis FAM18, complete genomeATP-dependent DNA helicase7e-1067.4
NC_014762:1715190:1715190171519017184983309Sulfuricurvum kujiense DSM 16994 chromosome, complete genomeuvrd/rep helicase1e-0966.6
NC_008262:2433979:2461165246116524634202256Clostridium perfringens SM101, complete genomeATP-dependent DNA helicase PcrA2e-0965.5
NC_007604:1183497:1186081118608111892663186Synechococcus elongatus PCC 7942, complete genomehypothetical protein4e-0964.7
NC_006576:414696:4315394315394347243186Synechococcus elongatus PCC 6301, complete genomehypothetical protein5e-0964.7
NC_006510:1400000:1410700141070014131232424Geobacillus kaustophilus HTA426, complete genomehypothetical protein5e-0964.3
NC_011661:1411383:1411383141138314132601878Dictyoglomus turgidum DSM 6724, complete genomeUvrD/REP helicase7e-0963.9
NC_020210:1275031:1289888128988812923052418Geobacillus sp. GHH01, complete genomehypothetical protein9e-0963.5
NC_016047:1234743:1254214125421412579183705Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completerecombination helicase AddA1e-0863.2
NC_014729:1185294:1198980119898012024383459Halogeometricum borinquense DSM 11551 chromosome, complete genomeATP-dependent exonuclase v subunit beta, helicase and exonuclease domain-containing1e-0862.8
NC_014831:329983:3299833299833323582376Thermaerobacter marianensis DSM 12885 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-0862.4
NC_010278:1467146:1468739146873914709372199Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA-dependent helicase II2e-0862.4
NC_007644:2099878:2099878209987821020672190Moorella thermoacetica ATCC 39073, complete genomeATP-dependent DNA helicase PcrA2e-0862
NC_013406:6494079:6494079649407964964092331Paenibacillus sp. Y412MC10 chromosome, complete genomeATP-dependent DNA helicase PcrA3e-0862
NC_011901:625712:6616286616286636432016Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent DNA helicase Rep5e-0861.2
NC_010513:44886:4643546435486062172Xylella fastidiosa M12 chromosome, complete genomeDNA-dependent helicase II5e-0861.2
NC_014924:3065430:3065430306543030676102181Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeDNA helicase II4e-0861.2
NC_011830:3025437:3043677304367730478554179Desulfitobacterium hafniense DCB-2, complete genomerecombination helicase AddA4e-0861.2
NC_014752:197000:2004822004822026892208Neisseria lactamica ST-640, complete genomeDNA helicase II4e-0861.2
NC_007907:1940000:1958144195814419623224179Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0860.8
NC_014541:4167916:4183237418323741854022166Ferrimonas balearica DSM 9799 chromosome, complete genomeATP-dependent DNA helicase UvrD6e-0860.8
NC_015660:3518931:3562042356204235642342193Geobacillus thermoglucosidasius C56-YS93 chromosome, completeATP-dependent DNA helicase PcrA1e-0760.1
NC_016147:2337244:2367923236792323712433321Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeUvrD/Rep-family ATP-dependent DNA helicase1e-0759.7
NC_002488:45219:4680546805489912187Xylella fastidiosa 9a5c, complete genomeDNA helicase II1e-0759.7
NC_019896:2805098:2819463281946328217422280Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein1e-0759.7
NC_012668:442601:4725634725634745782016Vibrio cholerae MJ-1236 chromosome 1, complete sequenceATP-dependent DNA helicase Rep2e-0759.3
NC_006270:718169:7181697181697203882220Bacillus licheniformis ATCC 14580, complete genomeATP-dependent DNA helicase2e-0759.3
NC_006322:717953:7179537179537201722220Bacillus licheniformis ATCC 14580, complete genomePcrA2e-0759.3
NC_015571:2273503:2285868228586822890923225Porphyromonas gingivalis TDC60, complete genomeUvrD/REP helicase domain-containing protein2e-0758.9
NC_013223:2279869:2304961230496123071052145Desulfohalobium retbaense DSM 5692, complete genomeUvrD/REP helicase3e-0758.5
NC_020299:127480:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein3e-0758.5
NC_020299:149118:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein3e-0758.5
NC_008536:2079052:2107542210754221097912250Solibacter usitatus Ellin6076, complete genomeUvrD/REP helicase3e-0758.5
NC_015519:2045935:2048474204847420513862913Tepidanaerobacter sp. Re1 chromosome, complete genomeUvrD/REP helicase4e-0758.2
NC_018012:3102215:3126846312684631290172172Thiocystis violascens DSM 198 chromosome, complete genomeDNA/RNA helicase5e-0757.8
NC_007912:231817:2322972322972343152019Saccharophagus degradans 2-40, complete genomeATP-dependent DNA helicase Rep5e-0757.8
NC_009465:90000:9221992219953893171Candidatus Vesicomyosocius okutanii HA, complete genomeATP-dependent DNA helicase7e-0757.4
NC_008060:3155133:3199939319993932020262088Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceUvrD/REP helicase1e-0657
NC_014408:806720:8331098331098358652757Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent DNA helicase1e-0657
NC_009074:3791232:3815754381575438178412088Burkholderia pseudomallei 668 chromosome I, complete sequenceATP-dependent DNA helicase Rep1e-0656.6
NC_009076:3876733:3891166389116638932532088Burkholderia pseudomallei 1106a chromosome I, complete sequenceATP-dependent DNA helicase Rep1e-0656.6
NC_006350:3957454:3977437397743739795242088Burkholderia pseudomallei K96243 chromosome 1, complete sequenceATP-dependent DNA helicase Rep1e-0656.6
NC_007434:111607:1258451258451280462202Burkholderia pseudomallei 1710b chromosome I, complete sequenceATP-dependent DNA helicase Rep1e-0656.6
NC_009621:389181:4008564008564040113156Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequenceUvrD/REP helicase1e-0656.6
NC_014970:928240:9282409282409301591920Mycoplasma haemofelis str. Langford 1, complete genomeATP-dependent DNA helicase UvrD/PcrA1e-0656.6
NC_007651:3719191:3719191371919137217372547Burkholderia thailandensis E264 chromosome I, complete sequenceATP-dependent DNA helicase Rep1e-0656.6
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA1e-0656.2
NC_009256:176403:1774401774401795272088Burkholderia vietnamiensis G4 chromosome 1, complete sequenceUvrD/REP helicase1e-0656.2
NC_018720:1186058:1186058118605811885712514Bifidobacterium asteroides PRL2011 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-0656.2
NC_015556:130437:1304371304371326382202Pseudomonas fulva 12-X chromosome, complete genomeUvrD/REP helicase2e-0655.5
NC_015508:296856:3134503134503166353186Agrobacterium sp. H13-3 chromosome linear, complete sequenceexodeoxyribonuclease V subunit beta3e-0655.1
NC_013204:1135397:1155067115506711575082442Eggerthella lenta DSM 2243, complete genomeUvrD/REP helicase3e-0655.1
NC_010368:191920:2037122037122073473636Halobacterium salinarum R1 plasmid PHS3, complete sequenceputative helicase4e-0655.1
NC_015859:1069116:1089451108945110925733123Corynebacterium variabile DSM 44702 chromosome, complete genomeATP-dependent DNA helicase II5e-0654.3
NC_008536:33776:4416344163474293267Solibacter usitatus Ellin6076, complete genomeUvrD/REP helicase8e-0653.9