Pre_GI: BLASTP Hits

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Query: NC_010723:173280:214336 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 214336, End: 214506, Length: 171

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:192951:212518212518212688171Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein3e-24110
NC_008262:2649289:265991126599112660120210Clostridium perfringens SM101, complete genomeferredoxin (fdxA)3e-2097.1
NC_003366:2788268:279545627954562795626171Clostridium perfringens str. 13, complete genomeferredoxin4e-2096.7
NC_008261:3014373:301809630180963018266171Clostridium perfringens ATCC 13124, complete genomeputative ferredoxin4e-2096.7
NC_015687:303810:357525357525357695171Clostridium acetobutylicum DSM 1731 chromosome, complete genomeferredoxin4e-1993.2
NC_003030:303812:357529357529357699171Clostridium acetobutylicum ATCC 824, complete genomeFerredoxin4e-1993.2
NC_014376:317312:335940335940336110171Clostridium saccharolyticum WM1 chromosome, complete genomeferredoxin2e-1477.8
NC_010001:4586000:460578746057874605954168Clostridium phytofermentans ISDg, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein4e-1476.6
NC_015977:3424178:342837134283713428541171Roseburia hominis A2-183 chromosome, complete genomeferredoxin1e-1375.1
NC_013171:1194500:121038912103891210562174Anaerococcus prevotii DSM 20548, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein5e-1372.8
NC_015437:572788:587179587179587349171Selenomonas sputigena ATCC 35185 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein4e-1270.1
NC_014220:2102000:211376621137662113942177Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-1063.5
NC_017068:638868:669587669587669757171Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative ferredoxin1e-0962
NC_015913:1491393:152901015290101529183174Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein1e-0962
NC_014933:270000:291573291573291743171Bacteroides helcogenes P 36-108 chromosome, complete genomeferredoxin2e-0961.2
NC_006347:700838:703656703656703826171Bacteroides fragilis YCH46, complete genomeferredoxin6e-0959.7
NC_014098:1670327:169521116952111695447237Bacillus tusciae DSM 2912 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0858.2
NC_014150:233194:236583236583236750168Brachyspira murdochii DSM 12563 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0857.4
NC_014314:1148000:115283211528321153095264Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein3e-0857
NC_015737:1976000:200251620025162003136621Clostridium sp. SY8519, complete genomehypothetical protein4e-0856.6
NC_018607:1134900:114914411491441149311168Brachyspira pilosicoli B2904 chromosome, complete genome4Fe-4S binding protein1e-0755.5
NC_018604:1329228:134347013434701343637168Brachyspira pilosicoli WesB complete genomeferredoxin, 4Fe-4S1e-0755.5
NC_019908:852230:854633854633854800168Brachyspira pilosicoli P43/6/78 chromosome, complete genomeferredoxin, 4Fe-4S1e-0755.5
NC_014330:2409559:242539224253922425559168Brachyspira pilosicoli 95/1000 chromosome, complete genomeferredoxin, 4Fe-4S1e-0755.5
NC_007498:197810:209116209116209799684Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein1e-0755.1
NC_014960:3410741:341155634115563411729174Anaerolinea thermophila UNI-1, complete genomeferredoxin2e-0754.3
NC_007404:387827:408901408901409152252Thiobacillus denitrificans ATCC 25259, complete genomeprobable ferredoxin protein2e-0754.3
NC_016627:1485799:1516511151651115183041794Clostridium clariflavum DSM 19732 chromosome, complete genomeNADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit5e-0753.1
NC_008750:450233:464493464493465413921Shewanella sp. W3-18-1, complete genomeglycyl-radical enzyme activating protein family5e-0753.1
NC_009438:212476:226933226933227853921Shewanella putrefaciens CN-32 chromosome, complete genomeglycyl-radical activating family protein5e-0753.1
NC_012225:377441:394516394516394683168Brachyspira hyodysenteriae WA1, complete genomehypothetical protein5e-0753.1
NC_013216:3408608:340951434095143409681168Desulfotomaculum acetoxidans DSM 771, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein6e-0752.8
NC_009663:2056166:205699520569952057246252Sulfurovum sp. NBC37-1, complete genome4Fe-4S ferredoxin7e-0752.8
NC_016584:1998000:2000204200020420013101107Desulfosporosinus orientis DSM 765 chromosome, complete genome4Fe-4S binding protein7e-0752.8
NC_004917:946550:962357962357962608252Helicobacter hepaticus ATCC 51449, complete genomeferredoxin9e-0752.4
NC_020304:547036:5599255599255613101386Desulfocapsa sulfexigens DSM 10523, complete genomecoenzyme F420-reducing hydrogenase, beta subunit7e-0752.4
NC_008309:190550:196692196692196952261Haemophilus somnus 129PT, complete genomeferredoxin1e-0652
NC_010519:71365:763667636676626261Haemophilus somnus 2336 chromosome, complete genome4Fe-4S ferredoxin1e-0652
NC_013887:245236:276610276610277101492Methanocaldococcus sp. FS406-22 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0651.2
NC_017187:1683619:170993617099361710190255Arcobacter butzleri ED-1, complete genomeferredoxin2e-0651.2
NC_009850:1822239:182638618263861826640255Arcobacter butzleri RM4018, complete genomeferredoxin2e-0651.2
NC_014973:1598429:1622245162224516235701326Geobacter sp. M18 chromosome, complete genomeelectron transfer flavoprotein alpha/beta-subunit3e-0650.8
NC_009635:800000:822153822153822548396Methanococcus aeolicus Nankai-3 chromosome, complete genome4Fe-4S ferredoxin3e-0650.4
NC_008344:2465042:246696524669652467234270Nitrosomonas eutropha C91, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein4e-0650.1
NC_020389:1683120:170782217078221708148327Methanosarcina mazei Tuc01, complete genomeFerredoxin4e-0650.1
NC_008563:4707826:472980647298064730723918Escherichia coli APEC O1, complete genomeputative pyruvate-formate lyase-activating enzyme4e-0650.1
NC_017046:2717810:271877427187742719034261Salmonella enterica subsp. enterica serovar Typhimurium str. 798ferredoxin6e-0649.7
NC_016860:2716152:271711627171162717376261Salmonella enterica subsp. enterica serovar Typhimurium strputative ferredoxin6e-0649.7
NC_003197:2720726:272169027216902721950261Salmonella typhimurium LT2, complete genomeputative ferredoxin6e-0649.7
NC_008702:1094663:110878411087841109107324Azoarcus sp. BH72, complete genomeprobable ferredoxin8e-0649.3
NC_014614:1166009:1166009116600911670311023Clostridium sticklandii, complete genomeputative iron-sulfur-binding protein8e-0649.3
NC_006370:768745:789602789602789856255Photobacterium profundum SS9 chromosome 1, complete sequenceputative ferredoxin7e-0649.3
NC_015847:1418036:142115114211511421549399Methanococcus maripaludis XI chromosome, complete genomeferredoxin6e-0649.3
NC_005791:1334880:133682813368281337226399Methanococcus maripaludis S2, complete genomeferredoxin6e-0649.3
NC_015562:1189111:1201006120100612021991194Methanotorris igneus Kol 5 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein8e-0648.9