Pre_GI: BLASTP Hits

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Query: NC_010673:113133:115070 Borrelia hermsii DAH, complete genome

Start: 115070, End: 115759, Length: 690

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:108057:114845114845115531687Borrelia turicatae 91E135, complete genomehypothetical protein1e-86319
NC_015589:1630461:164420516442051644855651Desulfotomaculum ruminis DSM 2154 chromosome, complete genomechannel protein hemolysin III family2e-27122
NC_021182:2059143:207545520754552076105651Clostridium pasteurianum BC1, complete genomechannel protein, hemolysin III family9e-26117
NC_018867:2354000:237540823754082376055648Dehalobacter sp. CF chromosome, complete genomehypothetical protein4e-24111
NC_012108:3824977:384579638457963846479684Desulfobacterium autotrophicum HRM2, complete genomeputative hemolysin-III related protein1e-1996.3
NC_014393:187454:202676202676203320645Clostridium cellulovorans 743B chromosome, complete genomechannel protein, hemolysin III family1e-1790.1
NC_008278:6717485:673153667315366732150615Frankia alni ACN14a, complete genomehypothetical protein3e-1685.1
NC_020387:149890:149890149890150477588Dehalococcoides mccartyi BTF08, complete genomeHly-III-like protein1e-1583.6
NC_016584:1583685:158368515836851584335651Desulfosporosinus orientis DSM 765 chromosome, complete genomehemolysin III family channel protein3e-1582
NC_012914:5194791:520375752037575204392636Paenibacillus sp. JDR-2, complete genomechannel protein, hemolysin III family3e-1582
NC_012785:638000:657498657498658199702Kosmotoga olearia TBF 19.5.1, complete genomechannel protein, hemolysin III family3e-1582
NC_003155:365500:380736380736381536801Streptomyces avermitilis MA-4680, complete genomehypothetical protein3e-1582
NC_014483:1973233:197801719780171978667651Paenibacillus polymyxa E681 chromosome, complete genomeHemolysin III-like protein3e-1582
NC_008699:1067855:111325711132571114021765Nocardioides sp. JS614, complete genomeHly-III family protein1e-1479.7
NC_012658:1581486:158509715850971585735639Clostridium botulinum Ba4 str. 657 chromosome, complete genomehemolysin III1e-1479.7
NC_012563:1704345:172341317234131724051639Clostridium botulinum A2 str. Kyoto, complete genomehemolysin III1e-1479.7
NC_013169:474856:494124494124494810687Kytococcus sedentarius DSM 20547, complete genomepredicted membrane protein, hemolysin III2e-1479.3
NC_014934:2985273:300677930067793007411633Cellulophaga algicola DSM 14237 chromosome, complete genomechannel protein, hemolysin iii family2e-1376.3
NC_007907:4714844:473482047348204735494675Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1376.3
NC_020126:2979959:299838329983832999111729Myxococcus stipitatus DSM 14675, complete genomehemolysin III family channel protein2e-1375.9
NC_010515:1678487:172707117270711727691621Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencechannel protein, hemolysin III family2e-1375.9
NC_008543:2666846:266831626683162668936621Burkholderia cenocepacia HI2424 chromosome 2, complete sequencechannel protein, hemolysin III family2e-1375.9
NC_008061:2582000:259805325980532598673621Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencechannel protein, hemolysin III family2e-1375.9
NC_008260:2961291:298232629823262983000675Alcanivorax borkumensis SK2, complete genomemembrane protein, hemolysin III homolog, putative5e-1374.7
NC_015844:3524175:353940335394033540035633Zobellia galactanivorans, complete genomehemolysin III5e-1374.7
NC_020064:3825916:384733138473313848011681Serratia marcescens FGI94, complete genomechannel protein, hemolysin III family9e-1373.6
NC_013159:3423500:342618634261863426875690Saccharomonospora viridis DSM 43017, complete genomechannel protein, hemolysin III family3e-1272
NC_013199:1407742:140925014092501409897648Lactobacillus rhamnosus Lc 705, complete genomepredicted ORF3e-1272
NC_013222:2795919:279977827997782800413636Robiginitalea biformata HTCC2501, complete genomeprobable hemolysin III4e-1271.6
NC_003454:370418:370824370824371471648Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHemolysin III1e-1170.1
NC_014472:2275254:228778022877802288415636Flavobacteriales bacterium HTCC2170 chromosome, complete genomeputative Hemolysin2e-1169.7
NC_012121:1676367:169482216948221695505684Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative hemolysin III3e-1168.9
NC_013956:3525711:354748235474823548159678Pantoea ananatis LMG 20103 chromosome, complete genomeYqfA3e-1168.9
NC_013739:5705325:570532557053255706032708Conexibacter woesei DSM 14684, complete genomechannel protein, hemolysin III family4e-1168.2
NC_008825:564392:567718567718568362645Methylibium petroleiphilum PM1, complete genomehemolysin III5e-1167.8
NC_015138:693865:708451708451709068618Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeHly-III family protein9e-1063.9
NC_014215:1841064:185818318581831858920738Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Hypothetical membrane protein5e-0961.2
NC_009725:2072475:210163021016302102268639Bacillus amyloliquefaciens FZB42, complete genomeYplQ5e-0858.2
NC_019842:2134803:215965321596532160291639Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hemolysin III5e-0858.2
NC_020410:2068500:209444020944402095078639Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative membrane hydrolase5e-0858.2
NC_017271:64293:685066850669102597Xanthomonas campestris pv. raphani 756C chromosome, completehemolysin III7e-0754.3
NC_010688:69458:747967479675497702Xanthomonas campestris pv. campestris, complete genomeHemolysin-III family membrane protein1e-0653.5
NC_003902:71494:729307293073586657Xanthomonas campestris pv. campestris str. ATCC 33913, completehemolysin III1e-0653.5
NC_007086:71493:729297292973585657Xanthomonas campestris pv. campestris str. 8004, complete genomehemolysin III1e-0653.5
NC_010717:129500:149292149292149954663Xanthomonas oryzae pv. oryzae PXO99A, complete genomehemolysin III2e-0652.8
NC_016010:65949:686226862269284663Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehemolysin-III family membrane protein2e-0652.4
NC_007508:64955:690886908869750663Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehemolysin-III family membrane protein2e-0652.4