Pre_GI Gene

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Host: NC_020387 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020387:149890 Dehalococcoides mccartyi BTF08, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface.There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
149890150477588Hly-III-like proteinQuickGO ontologyBLASTP
1504741524651992putative ABC transporter ATPase domain proteinQuickGO ontologyBLASTP
152599153456858hypothetical proteinBLASTP
1535821547661185flavoprotein HI0933 familyQuickGO ontologyBLASTP
154975155316342hypothetical proteinBLASTP
155329155586258hypothetical proteinBLASTP
155674155997324TM2 domain-containing proteinQuickGO ontologyBLASTP
156319156555237hypothetical protein
156666156968303hypothetical protein
1569941591652172hypothetical proteinBLASTP
1598581613361479hypothetical proteinBLASTP
1613651643582994type III restriction enzyme res subunitQuickGO ontologyBLASTP
1643621662841923type III restriction-modification protein methylation subunitQuickGO ontologyBLASTP
166299167057759hypothetical proteinBLASTP
1670541702633210DEAD-like helicase superfamily proteinQuickGO ontologyBLASTP
170294170494201helix-turn-helix DNA-binding domain-containing protein MerR-SF superfamilyQuickGO ontology
170676171161486hypothetical proteinBLASTP