Pre_GI: BLASTP Hits

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Query: NC_010634:1342393:1351719 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 1351719, End: 1351946, Length: 228

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:3609844:362729036272903627496207Serratia marcescens FGI94, complete genomeputative transcriptional regulator5e-1993.2
NC_012759:2633949:264247826424782642690213Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; DNA-binding transcriptional activator2e-1684
AC_000091:2747520:275730027573002757512213Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional activator2e-1684
NC_000913:2746886:275666627566662756878213Escherichia coli K12, complete genomeCP4-57 prophage; DNA-binding transcriptional activator2e-1684
NC_010473:2839902:284843128484312848643213Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; DNA-binding transcriptional activator2e-1684
NC_020260:603796:634711634711634926216Cronobacter sakazakii Sp291, complete genomephage transcriptional regulator AlpA2e-1581.3
NC_017328:1075535:108543310854331085738306Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator5e-1166.6
NC_008322:2077628:208644320864432086655213Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA8e-1165.9
NC_013361:1284579:129547712954771295785309Escherichia coli O26:H11 str. 11368 chromosome, complete genomeregulatory protein2e-1064.3
NC_002655:1448605:145872014587201459016297Escherichia coli O157:H7 EDL933, complete genomeputative prophage regulatory protein2e-1064.3
NC_002695:1364833:137494813749481375244297Escherichia coli O157:H7 str. Sakai, complete genomeputative regulatory protein2e-1064.3
NC_002655:1053082:106311310631131063409297Escherichia coli O157:H7 EDL933, complete genomeputative prophage regulatory protein2e-1064.3
NC_013008:1307392:131750713175071317803297Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeprophage regulatory protein2e-1064.3
NC_013364:1257801:126870912687091269005297Escherichia coli O111:H- str. 11128, complete genomeputative regulatory protein2e-1064.3
NC_008321:1993541:200355220035522003767216Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA2e-1064.3
NC_007946:1073135:108545710854571085753297Escherichia coli UTI89, complete genomepossible prophage regulatory protein3e-1063.5
NC_012691:2476223:250031525003152500668354Tolumonas auensis DSM 9187, complete genomephage transcriptional regulator, AlpA4e-0960.1
NC_004431:1119700:113207111320711132319249Escherichia coli CFT073, complete genomeProphage CP4-57 Regulatory protein alpA2e-0857.8
NC_017506:1100679:111453411145341114761228Marinobacter adhaerens HP15 chromosome, complete genomeprophage CP4-57 regulatory2e-0857.8
NC_009138:668000:682715682715682936222Herminiimonas arsenicoxydans, complete genomeputative prophage regulator protein3e-0857
NC_009659:1050532:110700311070031107224222Janthinobacterium sp. Marseille chromosome, complete genomeprophage cp4-57 regulatory protein AlpA3e-0857
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA5e-0856.2
NC_007969:2885249:289003828900382890298261Psychrobacter cryohalolentis K5, complete genomephage transcriptional regulator, AlpA1e-0755.5
NC_010322:5293652:531510753151075315289183Pseudomonas putida GB-1 chromosome, complete genomephage transcriptional regulator AlpA1e-0755.1
NC_005085:659378:678312678312678530219Chromobacterium violaceum ATCC 12472, complete genomeprobable prophage regulatory protein1e-0652
NC_014306:4901390:494030849403084940574267Erwinia billingiae Eb661, complete genomePhage transcriptional regulator, AlpA-family2e-0651.2
NC_012880:4117376:412043941204394120642204Dickeya dadantii Ech703, complete genomephage transcriptional regulator, AlpA2e-0650.8
NC_012912:4194821:419819641981964198399204Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA2e-0650.8
NC_013592:4295449:430099243009924301195204Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA2e-0650.8
NC_014500:443874:459413459413459616204Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein2e-0650.8
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein2e-0650.8
NC_008321:1993541:201135520113552011549195Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA5e-0649.7
NC_005810:1130251:114441011444101144610201Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator7e-0649.3
NC_010159:1417993:142247114224711422671201Yersinia pestis Angola, complete genometranscriptional regulator, AlpA family7e-0649.3
NC_008149:3251196:326535532653553265555201Yersinia pestis Nepal516, complete genometranscriptional regulator7e-0649.3
NC_009381:2939782:295394029539402954140201Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator7e-0649.3
NC_017168:4155143:416033541603354160535201Yersinia pestis A1122 chromosome, complete genomeAlpA family transcriptional regulator7e-0649.3
NC_017265:1136000:113964911396491139849201Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,DNA-binding protein7e-0649.3
NC_017047:2079368:208454920845492084743195Rahnella aquatilis HX2 chromosome, complete genomeputative prophage regulatory protein6e-0649.3
NC_008150:650899:655055655055655255201Yersinia pestis Antiqua, complete genometranscriptional regulator7e-0649.3