Pre_GI: BLASTP Hits

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Query: NC_010572:8493946:8495626 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8495626, End: 8497602, Length: 1977

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:33724:4832848328503041977Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein0865
NC_014666:3629696:3637375363737536396542280Frankia sp. EuI1c chromosome, complete genomehypothetical protein4e-49196
NC_006363:36959:4500745007476552649Nocardia farcinica IFM 10152 plasmid pNF2, complete sequencehypothetical protein2e-44180
NC_018531:1900619:1912565191256519151142550Arthrobacter sp. Rue61a chromosome, complete genomenephrocystin2e-43178
NC_014318:5586287:5601209560120956037942586Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein6e-41169
NC_017186:5586328:5601422560142256038362415Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein8e-41169
NC_013595:3541012:3559577355957735619822406Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-36153
NC_003888:5042283:5055828505582850587282901Streptomyces coelicolor A3(2), complete genomeATP/GTP binding protein7e-36152
NC_010572:82000:143100143100143963864Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-35150
NC_008278:514600:5337995337995363272529Frankia alni ACN14a, complete genomeputative ATP/GTP binding protein3e-33144
NC_009973:178000:2139952139952173123318Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeTPR repeat-containing protein2e-32141
NC_016582:10326938:103454851034548510346480996Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-31138
NC_017186:5586328:5599527559952756009391413Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-31138
NC_003888:6103534:6128360612836061310202661Streptomyces coelicolor A3(2), complete genomeATP /GTP-binding protein5e-31136
NC_011726:1827000:1827925182792518302282304Cyanothece sp. PCC 8801, complete genomeTetratricopeptide TPR_2 repeat protein1e-30135
NC_009921:5681677:5687555568755556895822028Frankia sp. EAN1pec, complete genomeputative ATP/GTP binding protein4e-30133
NC_008278:3601959:3614846361484636180523207Frankia alni ACN14a, complete genomehypothetical protein; putative P-loop containing nucleotide triphosphate hydrolases and TIR domains7e-30132
NC_008312:5386630:5391012539101253949983987Trichodesmium erythraeum IMS101, complete genomepeptidase-like6e-29129
NC_014033:395000:4039554039554072753321Prevotella ruminicola 23 chromosome, complete genomehypothetical protein5e-29129
NC_005125:2366778:2384287238428723873163030Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-28127
NC_014391:6749156:6766968676696867694152448Micromonospora aurantiaca ATCC 27029 chromosome, complete genometetratricopeptide domain-containing protein1e-27125
NC_013161:1801904:1803292180329218053102019Cyanothece sp. PCC 8802, complete genomeNB-ARC domain protein3e-26120
NC_015577:676453:6911066911066952424137Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein4e-26120
NC_013929:3660321:3669043366904336716582616Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-25117
NC_007777:1018824:1018824101882410216282805Frankia sp. CcI3, complete genomeputative ATP/GTP binding protein6e-25116
NC_007759:2146254:2165995216599521671941200Syntrophus aciditrophicus SB, complete genometetratricopeptide repeat family protein2e-24114
NC_013440:811780:8253318253318290173687Haliangium ochraceum DSM 14365, complete genomeHI0933 family protein4e-24113
NC_003272:4621554:4636981463698146391132133Nostoc sp. PCC 7120, complete genomehypothetical protein4e-24113
NC_014033:395000:4073204073204097792460Prevotella ruminicola 23 chromosome, complete genomehypothetical protein2e-23111
NC_014666:7838500:7846062784606278490703009Frankia sp. EuI1c chromosome, complete genomeNB-ARC domain protein3e-23110
NC_016025:807226:8105628105628139033342Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein3e-23110
NC_014623:3029853:3047421304742130520314611Stigmatella aurantiaca DW4/3-1 chromosome, complete genometetratricopeptide repeat-containing protein3e-22107
NC_015577:676453:6848016848016910946294Treponema azotonutricium ZAS-9 chromosome, complete genometranslocase9e-22105
NC_014666:1805806:1827973182797318308462874Frankia sp. EuI1c chromosome, complete genomesigma-70 region 2 domain protein1e-21105
NC_009973:178000:2114062114062128151410Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeTPR repeat-containing protein5e-21103
NC_014623:1829000:1844588184458818477163129Stigmatella aurantiaca DW4/3-1 chromosome, complete genometetratricopeptide repeat-containing protein4e-20100
NC_009974:53865:5386553865567262862Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completeTPR repeat-containing protein8e-2099.4
NC_005125:4283345:4291713429171342932451533Gloeobacter violaceus PCC 7421, complete genomesimilar to kinesin light chain1e-1998.6
NC_011060:1538375:1551720155172015555713852Pelodictyon phaeoclathratiforme BU-1, complete genomeTPR repeat-containing protein3e-1997.4
NC_014666:1601972:1620253162025316265196267Frankia sp. EuI1c chromosome, complete genomehypothetical protein5e-1996.7
NC_014623:9552:1478114781178883108Stigmatella aurantiaca DW4/3-1 chromosome, complete genometetratricopeptide repeat-containing protein3e-1894.4
NC_013757:1438812:1458928145892814615072580Geodermatophilus obscurus DSM 43160, complete genomeputative ATP/GTP binding protein3e-1894.4
NC_014815:6616500:6636414663641466383451932Micromonospora sp. L5 chromosome, complete genometpr repeat-containing protein2e-1791.7
NC_009974:53865:7785377853804262574Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completeTPR repeat-containing protein3e-1790.9
NC_017030:8766757:8789107878910787923223216Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein6e-1789.7
NC_015577:862659:8704138704138733012889Treponema azotonutricium ZAS-9 chromosome, complete genomesurface antigen BspA2e-1688.2
NC_014623:2475598:2475598247559824788403243Stigmatella aurantiaca DW4/3-1 chromosome, complete genometetratricopeptide repeat-containing protein2e-1687.8
NC_016582:5769080:5782633578263357847442112Streptomyces bingchenggensis BCW-1 chromosome, complete genomeATP/GTP-binding protein5e-1686.7
NC_013510:1849751:1855024185502418591754152Thermomonospora curvata DSM 43183, complete genomehypothetical protein7e-1686.3
NC_003888:8594500:859883085988308599405576Streptomyces coelicolor A3(2), complete genomehypothetical protein7e-1686.3
NC_013131:7889127:7901223790122379056294407Catenulispora acidiphila DSM 44928, complete genomeTetratricopeptide TPR_42e-1584.7
NC_017186:8683964:8690906869090686945863681Amycolatopsis mediterranei S699 chromosome, complete genomeNB-ARC domain-containing protein7e-1583.2
NC_014318:8687448:8690850869085086945303681Amycolatopsis mediterranei U32 chromosome, complete genomeNB-ARC domain-containing protein7e-1583.2
NC_013757:1212308:1230217123021712331952979Geodermatophilus obscurus DSM 43160, complete genomeputative ATP/GTP binding protein7e-1582.8
NC_019757:3492500:3506963350696335091942232Cylindrospermum stagnale PCC 7417, complete genomeTfp pilus assembly protein PilF2e-1378.2
NC_013757:900500:9101879101879131893003Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, SARP family2e-1378.2
NC_005125:4283345:4289005428900542917282724Gloeobacter violaceus PCC 7421, complete genomesimilar to kinesin light chain6e-1376.6
NC_008312:1725763:1731395173139517359184524Trichodesmium erythraeum IMS101, complete genomeTetratricopeptide TPR_29e-1375.9
NC_013510:1849751:1862641186264118651722532Thermomonospora curvata DSM 43183, complete genomeNB-ARC domain protein1e-1275.5
NC_020126:1943092:1946838194683819496632826Myxococcus stipitatus DSM 14675, complete genomeserine/threonine protein kinase3e-1273.9
NC_010830:1038292:1038292103829210419303639Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1273.6
NC_014318:5586287:5599486559948656006461161Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein1e-1172.4
NC_007333:430000:4499244499244544954572Thermobifida fusca YX, complete genomehypothetical protein2e-1171.2
NC_015510:6373937:6386806638680663896882883Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein4e-1170.5
NC_014972:409884:4126654126654145091845Desulfobulbus propionicus DSM 2032 chromosome, complete genomeTPR repeat-containing protein3e-1067.8
NC_016582:4983222:4994103499410349962472145Streptomyces bingchenggensis BCW-1 chromosome, complete genomeATP/GTP-binding protein4e-1067.4
NC_016582:4983222:4983222498322249870823861Streptomyces bingchenggensis BCW-1 chromosome, complete genomeATP/GTP-binding protein3e-0963.9
NC_015434:666692:6780696780696803542286Verrucosispora maris AB-18-032 chromosome, complete genomeTPR repeat-containing protein4e-0963.5
NC_014355:1865003:1865003186500318681403138Candidatus Nitrospira defluvii, complete genomehypothetical protein6e-0860.1
NC_013757:729986:749063749063749767705Geodermatophilus obscurus DSM 43160, complete genometetratricopeptide TPR_49e-0859.3
NC_008095:2011748:2027037202703720301863150Myxococcus xanthus DK 1622, complete genomeserine/threonine kinase PKN81e-0758.5
NC_013757:3651646:3667190366719036695712382Geodermatophilus obscurus DSM 43160, complete genomeNB-ARC domain protein2e-0758.5
NC_009929:58465:766077660777578972Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceTPR domain protein3e-0757.8