Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:5386630 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
53866305387172543response regulator receiver proteinQuickGO ontologyBLASTP
538791053889921083rfaE bifunctional proteinQuickGO ontologyBLASTP
53895365390171636hypothetical proteinBLASTP
539101253949983987peptidase-likeQuickGO ontologyBLASTP
539559354001884596Cna B-typeQuickGO ontologyBLASTP
54007815401284504NADH dehydrogenase ubiquinone 30 kDa subunitQuickGO ontologyBLASTP
54012775401999723NADH-quinone oxidoreductase B subunitQuickGO ontologyBLASTP
54019905402397408NADH-ubiquinoneplastoquinone oxidoreductase chain 3QuickGO ontologyBLASTP
54025795402920342Rubredoxin-type FeCys4 proteinQuickGO ontologyBLASTP
540295454039671014glycosyl hydrolase BNR repeatQuickGO ontologyBLASTP
54042925404540249cytochrome b559 alpha subunitQuickGO ontologyBLASTP
54045655404699135cytochrome b559 beta subunitQuickGO ontologyBLASTP
54047125404837126photosystem II protein PsbLQuickGO ontology
54049915405113123photosystem II protein PsbJQuickGO ontology
54057055406397693hypothetical proteinBLASTP
540652354083791857hypothetical proteinBLASTP