Pre_GI: BLASTP Hits

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Query: NC_010501:4989455:4990419 Pseudomonas putida W619, complete genome

Start: 4990419, End: 4990925, Length: 507

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012721:109500:129270129270129809540Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, MarR family protein3e-45181
NC_016628:763833:791320791320791802483Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, MarR family protein2e-34144
NC_009925:5957806:596064059606405961131492Acaryochloris marina MBIC11017, complete genometranscriptional regulator, MarR family5e-34143
NC_008321:3189974:320949732094973210033537Shewanella sp. MR-4, complete genometranscriptional regulator, MarR family2e-32137
NC_007645:3712272:372537637253763725885510Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator4e-32137
NC_003295:2507850:252543025254302525927498Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-29128
NC_014963:1951108:196689019668901967690801Terriglobus saanensis SP1PR4 chromosome, complete genomeregulatory protein MarR1e-27122
NC_016745:123772:145693145693146214522Oceanimonas sp. GK1 chromosome, complete genomeMarR family transcriptional regulator2e-27121
NC_016111:2257166:227261322726132273110498Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional regulator pecS2e-27121
NC_011283:819970:835107835107835613507Klebsiella pneumoniae 342 chromosome, complete genomeMarR family transcriptional regulator6e-27119
NC_009664:1195630:121911012191101219676567Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, MarR family6e-25113
NC_014391:6000834:601967660196766020215540Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein MarR8e-25112
NC_006576:414696:427513427513428013501Synechococcus elongatus PCC 6301, complete genometranscriptional regulator1e-23109
NC_007604:1183497:119279211927921193292501Synechococcus elongatus PCC 7942, complete genometranscriptional regulator, MarR family1e-23109
NC_008711:1224164:123368312336831234186504Arthrobacter aurescens TC1, complete genomeputative transcriptional regulator, MarR family8e-23106
NC_014307:3240430:325987732598773260389513Ralstonia solanacearum CFBP2957 chromosome, complete genomeMarR family transcriptional regulator1e-2099.4
NC_014311:3348102:336288433628843363396513Ralstonia solanacearum PSI07 chromosome, complete genomeMarR family transcriptional regulator2e-2098.2
NC_014210:2372813:240736024073602407845486Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MarR family1e-1892
NC_018524:4988810:503203150320315032546516Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemarR family protein7e-1889.7
NC_003888:7866148:788769478876947888284591Streptomyces coelicolor A3(2), complete genomeMarR-family regulatory protein2e-1685.1
NC_016111:6175975:617936861793686179952585Streptomyces cattleya NRRL 8057, complete genomeMarR family transcriptional regulator7e-1683.2
NC_013131:4356247:436059143605914361568978Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, MarR family2e-1478.6
NC_010623:1961685:196625319662531966864612Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, MarR family3e-1477.8
NC_010572:4585500:459085645908564591413558Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative MarR-family transcriptional regulator2e-1375.1
NC_016582:7033000:703691570369157037463549Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMarR family transcriptional regulator4e-1270.5
NC_016641:1148220:116702111670211167530510Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator6e-1270.1
NC_016111:6222461:624377562437756244272498Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1168.9
NC_003888:4523500:452946845294684530016549Streptomyces coelicolor A3(2), complete genomeMarR-family transcriptional regulator2e-1168.6
NC_014622:5378000:539877053987705399279510Paenibacillus polymyxa SC2 chromosome, complete genomeMarR family transcriptional regulator5e-1167
NC_010407:3132683:313516031351603135693534Clavibacter michiganensis subsp. sepedonicus chromosome, completeMarR family transcriptional regulator5e-1063.5
NC_009778:1717458:174751417475141748005492Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-1062.8
NC_010498:1615980:162957916295791630013435Escherichia coli SMS-3-5, complete genomemultiple antibiotic resistance protein MarR2e-0961.6
CP002185:1727493:173180817318081732242435Escherichia coli W, complete genomeDNA-binding transcriptional repressor of multiple antibiotic resistance2e-0961.6
CP002516:2361628:237361323736132374047435Escherichia coli KO11, complete genometranscriptional regulator, MarR family2e-0961.6
NC_009800:1632585:163594116359411636375435Escherichia coli HS, complete genomemultiple antibiotic resistance protein MarR2e-0961.6
CU928160:1625535:162985016298501630284435Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional repressor of multiple antibiotic resistance2e-0961.6
NC_011415:1715644:171995917199591720393435Escherichia coli SE11 chromosome, complete genomeDNA-binding transcriptional repressor MarR2e-0961.6
NC_011741:1625535:162985016298501630284435Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional repressor MarR2e-0961.6
NC_016902:2361628:237361323736132374047435Escherichia coli KO11FL chromosome, complete genomeMarR family transcriptional regulator2e-0961.6
NC_008563:1651270:165706116570611657495435Escherichia coli APEC O1, complete genomemultiple antibiotic resistance protein MarR2e-0961.6
NC_010067:1414000:141647714164771416911435Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0857.8
NC_016109:62000:993659936599847483Kitasatospora setae KM-6054, complete genomeputative MarR family transcriptional regulator5e-0857
NC_016109:8664974:868343286834328683914483Kitasatospora setae KM-6054, complete genomeputative MarR family transcriptional regulator5e-0857
NC_010512:1015557:102075710207571021254498Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, MarR family1e-0755.8
NC_016604:3184855:320167932016793202197519Mycobacterium rhodesiae NBB3 chromosome, complete genometranscriptional regulator1e-0755.8
NC_004193:375416:471200471200471631432Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator4e-0754.3
NC_009338:630130:649885649885650403519Mycobacterium gilvum PYR-GCK chromosome, complete genomeMarR family transcriptional regulator4e-0754.3
UCMB5137:2418403:242881124288112429257447Bacillus atrophaeus UCMB-5137MarR family transcriptional regulator4e-0754.3
CP002207:2452286:246265224626522463098447Bacillus atrophaeus 1942, complete genomeMarR family transcriptional regulator4e-0754.3
NC_014639:2452286:246265224626522463098447Bacillus atrophaeus 1942 chromosome, complete genomeMarR family transcriptional regulator4e-0754.3
NC_015760:61345:806518065181079429Streptococcus salivarius CCHSS3, complete genomemultidrug resistance operon repressor3e-0754.3
NC_009077:1725683:175349617534961754014519Mycobacterium sp. JLS, complete genometranscriptional regulator, MarR family4e-0753.9
NC_008705:1790222:181803518180351818553519Mycobacterium sp. KMS, complete genometranscriptional regulator, MarR family4e-0753.9
NC_009338:555587:576201576201576719519Mycobacterium gilvum PYR-GCK chromosome, complete genomeMarR family transcriptional regulator6e-0753.5
NC_014814:169374:196482196482197039558Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, MarR family6e-0753.5
NC_016605:50695:687116871169109399Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeiron dependent repressor, marR family2e-0652
NC_004431:3409389:342877934287793429330552Escherichia coli CFT073, complete genomePapX protein2e-0651.6
NC_015942:447308:460132460132460623492Acidithiobacillus ferrivorans SS3 chromosome, complete genomeMarR family transcriptional regulator2e-0651.6
NC_008253:4735418:474532147453214745875555Escherichia coli 536, complete genomePapX protein3e-0651.2
NC_013446:2961647:297742629774262977920495Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MarR family3e-0651.2
NC_009725:692237:719938719938720450513Bacillus amyloliquefaciens FZB42, complete genomeYetL3e-0651.2
NC_008253:3941938:395838139583813958932552Escherichia coli 536, complete genomeMarR-family transcriptional regulatory protein4e-0650.8
NC_007946:4779745:478828747882874788838552Escherichia coli UTI89, complete genomeputative regulator PapX protein4e-0650.4
NC_015671:1865752:187463918746391874980342Cellvibrio gilvus ATCC 13127 chromosome, complete genome8e-0649.7