Pre_GI: BLASTP Hits

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Query: NC_010334:609636:626708 Shewanella halifaxensis HAW-EB4, complete genome

Start: 626708, End: 626914, Length: 207

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010506:4873487:488892448889244889130207Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, XRE family2e-28124
NC_009901:4216206:422500142250014225207207Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, XRE family3e-28123
NC_009901:2272206:229964522996452299851207Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, XRE family3e-28123
NC_016901:5130147:515172851517285151934207Shewanella baltica OS678 chromosome, complete genomehelix-turn-helix domain-containing protein7e-27119
NC_009665:5072413:509397950939795094185207Shewanella baltica OS185 chromosome, complete genomeXRE family transcriptional regulator7e-27119
NC_009997:5188221:521110652111065211312207Shewanella baltica OS195, complete genometranscriptional regulator, XRE family7e-27119
NC_012668:160357:168333168333168542210Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-1889.4
NC_012668:1623350:164392816439281644137210Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-1889.4
NC_012668:2258854:228069922806992280908210Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-1889.4
NC_009434:695582:749946749946750173228Pseudomonas stutzeri A1501, complete genomeCro/CI family transcriptional regulator1e-1685.1
NC_004347:4007847:401423640142364014463228Shewanella oneidensis MR-1, complete genometranscriptional regulator, Cro/CI family6e-1682.8
NC_015633:2565753:258423625842362584445210Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-1581.3
NC_009656:44500:901009010090321222Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1477.8
NC_020829:940692:947744947744947956213Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein4e-1477
NC_008740:220642:235926235926236135210Marinobacter aquaeolei VT8, complete genome5e-1373.2
NC_018868:619113:654559654559654795237Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeCro/CI family transcriptional regulator2e-1167.8
NC_014965:997344:101503010150301015260231Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein4e-1063.2
NC_004459:2025436:203074620307462030976231Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator1e-0962
NC_010682:460523:491925491925492170246Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, XRE family1e-0961.6
NC_008061:2582000:259167425916742591919246Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, XRE family2e-0857.8
NC_008543:2666846:267507026750702675315246Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, XRE family2e-0857.8
NC_010322:4623867:467058446705844670829246Pseudomonas putida GB-1 chromosome, complete genomeXRE family transcriptional regulator2e-0857.8
NC_007510:3340008:334567233456723345986315Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, XRE family5e-0856.6
NC_010943:1332243:135334013533401353636297Stenotrophomonas maltophilia K279a, complete genomeputative HTH transcriptional regulator6e-0856.2
NC_011662:1017933:102195810219581022257300Thauera sp. MZ1T, complete genometranscriptional regulator, XRE family7e-0856.2
NC_014500:3097362:313932931393293139574246Dickeya dadantii 3937 chromosome, complete genomehypothetical protein9e-0855.8
NC_010002:2518599:253459725345972534992396Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family9e-0855.8
NC_012912:1701231:171734517173451717590246Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family8e-0855.8
NC_018691:3041851:306006930600693060359291Alcanivorax dieselolei B5 chromosome, complete genomeputative transcriptional regulator9e-0855.5
NC_008825:2564965:257084225708422571141300Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-0754.7
NC_012808:4137000:413802541380254138288264Methylobacterium extorquens AM1, complete genomehypothetical protein2e-0754.7
NC_007650:2429307:245966124596612459864204Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein2e-0754.3
NC_016147:1961000:198513019851301985420291Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0754.3
NC_014910:242845:267842267842268135294Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein3e-0753.9
NC_006351:520500:521079521079521324246Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding regulatory protein3e-0753.9
NC_002936:1395432:140162414016241401842219Dehalococcoides ethenogenes 195, complete genomeDNA-binding protein3e-0753.9
NC_009667:1371924:137862013786201378910291Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator6e-0753.1
NC_006351:520500:522475522475522720246Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding regulatory protein7e-0752.8
NC_010512:1015557:102764110276411027886246Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, XRE family7e-0752.8
NC_007508:2941889:295324729532472953522276Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein7e-0752.8
NC_007650:2429307:245827324582732458473201Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein7e-0752.8
NC_008322:373531:373304373304373534231Shewanella sp. MR-7, complete genometranscriptional regulator, XRE family8e-0752.4
NC_007510:1959883:200793820079382008219282Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, XRE family9e-0752.4
NC_014216:2860342:286928428692842869517234Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometranscriptional regulator, XRE family1e-0652.4
NC_018080:2288700:231214223121422312387246Pseudomonas aeruginosa DK2 chromosome, complete genomeXRE family transcriptional regulator1e-0652.4
NC_010170:2246993:226460422646042264897294Bordetella petrii, complete genomepredicted transcriptional regulator1e-0652
NC_015379:908904:937726937726937971246Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, Cro/Ci family2e-0651.2
NC_020409:1173796:118106611810661181392327Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, XRE family4e-0650.1
NC_016616:2997348:300945030094503009686237Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator4e-0650.1
NC_014483:1146682:114946911494691149816348Paenibacillus polymyxa E681 chromosome, complete genomePutative HTH-type transcriptional regulator5e-0650.1
NC_003047:536151:546632546632546901270Sinorhizobium meliloti 1021, complete genomeHYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN5e-0649.7
NC_016641:2894899:291399229139922914339348Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator6e-0649.7
NC_007951:2233676:225294022529402253398459Burkholderia xenovorans LB400 chromosome 1, complete sequencePredicted transcriptional regulator, XRE family6e-0649.7