Pre_GI: BLASTP Hits

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Query: NC_010322:1:16186 Pseudomonas putida GB-1 chromosome, complete genome

Start: 16186, End: 17301, Length: 1116

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1:1540415404165191116Pseudomonas putida F1, complete genomecopper resistance B precursor0762
NC_010501:1:1542415424165391116Pseudomonas putida W619, complete genomecopper resistance B precursor0762
NC_015733:5955467:5962156596215659633011146Pseudomonas putida S16 chromosome, complete genomecopper resistance B9e-179626
NC_002947:6123608:6130432613043261315411110Pseudomonas putida KT2440, complete genomecopper resistance protein B6e-178623
NC_010501:5735656:5740438574043857415531116Pseudomonas putida W619, complete genomecopper resistance B precursor2e-176618
NC_009439:2427120:2452266245226624533571092Pseudomonas mendocina ymp, complete genomecopper resistance B precursor1e-161569
NC_009434:3611738:3655353365535336565131161Pseudomonas stutzeri A1501, complete genomecopper resistance protein B1e-158559
NC_015410:2698572:2743587274358727446361050Pseudomonas mendocina NK-01 chromosome, complete genomecopper resistance B4e-155547
NC_017986:3283433:329173032917303292665936Pseudomonas putida ND6 chromosome, complete genomecopper resistance B1e-145516
NC_015740:2692023:269964926996492700446798Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecopper resistance B8e-132470
NC_007492:4310828:431254343125434313448906Pseudomonas fluorescens PfO-1, complete genomeCopper resistance B precursor8e-111400
NC_010943:2465976:2473305247330524745731269Stenotrophomonas maltophilia K279a, complete genomeputative copper resistance protein2e-97356
NC_011748:3958572:397247939724793973378900Escherichia coli 55989, complete genomeCopper resistance protein B precursor1e-82306
NC_009778:4188000:421678942167894217688900Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-82306
CU928145:3958572:397247939724793973378900Escherichia coli 55989 chromosome, complete genomeCopper resistance protein B precursor1e-82306
NC_010682:1913941:1928081192808119293701290Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance B precursor2e-68259
NC_018697:1343756:136837413683741369126753Cycloclasticus sp. P1 chromosome, complete genomeCopB-like protein1e-66253
NC_010170:4800000:484763348476334848457825Bordetella petrii, complete genomecopper resistance protein B precursor2e-61236
NC_007404:1388049:140492114049211405787867Thiobacillus denitrificans ATCC 25259, complete genomeprobable copper resistance protein B1e-58226
NC_008782:1308007:131136913113691312349981Acidovorax sp. JS42, complete genomecopper resistance B precursor7e-56218
NC_009138:1518315:153919415391941540174981Herminiimonas arsenicoxydans, complete genomeCopper resistance protein B precursor like (partial)1e-55217
NC_014640:1179382:119176311917631192743981Achromobacter xylosoxidans A8 chromosome, complete genomecopper resistance protein B domain-containing protein2e-55216
NC_009659:1923925:195376319537631954743981Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein B2e-54213
NC_014414:2491811:250670625067062507506801Parvularcula bermudensis HTCC2503 chromosome, complete genomecopper resistance protein B5e-53208
NC_009659:892272:896525896525897520996Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein B8e-53207
NC_018868:619113:633990633990634853864Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeputative copper resistance protein B1e-45183
NC_016026:1224129:124799912479991248781783Micavibrio aeruginosavorus ARL-13 chromosome, complete genomecopper resistance B family protein4e-45182
NC_012982:711122:743128743128743823696Hirschia baltica ATCC 49814, complete genomecopper resistance B precursor9e-44177
NC_012483:1408500:143300514330051433748744Acidobacterium capsulatum ATCC 51196, complete genomeputative copper resistance protein B3e-43176
NC_014532:988351:997713997713998483771Halomonas elongata DSM 2581, complete genomecopper resistance B precursor9e-42171
NC_012808:1920500:193697019369701937815846Methylobacterium extorquens AM1, complete genomeCopper resistance protein CopB precursor4e-40165
NC_012988:1280610:129696112969611297770810Methylobacterium extorquens DM4, complete genomecopper resistance protein CopB2e-37157
NC_012808:1979000:198264019826401983428789Methylobacterium extorquens AM1, complete genomeputative copper resistance protein CopB1e-36154
NC_017986:3283433:3292987329298732949661980Pseudomonas putida ND6 chromosome, complete genomeCopA family copper resistance protein1e-1274.3
NC_010501:1:1686716867188251959Pseudomonas putida W619, complete genomecopper-resistance protein, CopA family1e-1274.3
NC_010322:1:1762917629195871959Pseudomonas putida GB-1 chromosome, complete genomeCopA family copper resistance protein1e-1274.3
NC_009512:1:1684716847188622016Pseudomonas putida F1, complete genomecopper-resistance protein, CopA family1e-1274.3
NC_015733:5955467:5959897595989759618341938Pseudomonas putida S16 chromosome, complete genomeCopA family copper resistance protein9e-1168.2
NC_002947:6123608:6131833613183361338422010Pseudomonas putida KT2440, complete genomecopper resistance protein A3e-1066.6
NC_009727:766000:7796537796537820642412Coxiella burnetii Dugway 7E9-12, complete genomecopper-resistance protein, CopA family protein6e-0962
NC_015740:2692023:2701015270101527027121698Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecopper resistance protein A3e-0859.7
NC_010322:1:172911729117614324Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein9e-0651.6
NC_009512:1:165091650916850342Pseudomonas putida F1, complete genomehypothetical protein9e-0651.6
NC_010501:1:165291652916870342Pseudomonas putida W619, complete genomehypothetical protein9e-0651.6