Pre_GI: BLASTP Hits

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Query: NC_010162:9311465:9311465 Sorangium cellulosum 'So ce 56', complete genome

Start: 9311465, End: 9312526, Length: 1062

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009328:1867971:1878226187822618792271002Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeIntra-cellular xylanase4e-85315
NC_014915:1880748:189447518944751895470996Geobacillus sp. Y412MC52 chromosome, complete genomeEndo-1,4-beta-xylanase1e-84313
NC_013411:2739989:275453727545372755532996Geobacillus sp. Y412MC61, complete genomeEndo-1,4-beta-xylanase1e-84313
NC_014392:1769803:1796734179673418005313798Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeCellulose 1,4-beta-cellobiosidase1e-79296
NC_014720:980000:1006806100680610112364431Caldicellulosiruptor kronotskyensis 2002 chromosome, completecellulose 1,4-beta-cellobiosidase2e-79296
NC_012034:1925983:1938607193860719430434437Anaerocellum thermophilum DSM 6725, complete genomeglycoside hydrolase family 485e-79294
NC_009437:1189432:1216344121634412194633120Caldicellulosiruptor saccharolyticus DSM 8903, complete genomecellulose 1,4-beta-cellobiosidase1e-78293
NC_019970:929666:9354509354509364661017Thermoanaerobacterium thermosaccharolyticum M0795, complete genomebeta-1,4-xylanase4e-77288
NC_010003:225420:2398982398982430233126Petrotoga mobilis SJ95, complete genomeEndo-1,4-beta-xylanase4e-75281
NC_014817:1063173:1066726106672610679431218Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceendo-1,4-beta-xylanase3e-56219
NC_020210:1908000:1922732192273219239551224Geobacillus sp. GHH01, complete genomeendo-1,4-beta-xylanase2e-56219
NC_014206:1745203:1752005175200517532281224Geobacillus sp. C56-T3 chromosome, complete genomeendo-1,4-beta-xylanase2e-56219
NC_016627:2799453:2801372280137228037592388Clostridium clariflavum DSM 19732 chromosome, complete genomebeta-1,4-xylanase3e-55216
NC_015690:977131:9806519806519817751125Paenibacillus mucilaginosus KNP414 chromosome, complete genomeendo-1,4-beta-xylanase1e-54213
NC_016935:976059:9833889833889845121125Paenibacillus mucilaginosus 3016 chromosome, complete genomeendo-1,4-beta-xylanase4e-54211
NC_016582:8711199:8718179871817987192551077Streptomyces bingchenggensis BCW-1 chromosome, complete genomebeta-1,4-xylanase2e-51203
NC_016023:915178:9397099397099407851077Bacillus coagulans 36D1 chromosome, complete genomeglycoside hydrolase family protein6e-51201
NC_013158:1085937:108593710859371086923987Halorhabdus utahensis DSM 12940, complete genomeEndo-1,4-beta-xylanase5e-49195
NC_014623:9363409:9381076938107693827041629Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeendo-1,4-beta-xylanase z2e-48192
NC_016582:8711199:8719299871929987207201422Streptomyces bingchenggensis BCW-1 chromosome, complete genomebeta-1,4-xylanase3e-48192
NC_014210:2638773:2649757264975726508781122Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Endo-1,4-beta-xylanase7e-44177
NC_009480:99640:1321701321701338011632Clavibacter michiganensis subsp. michiganensis NCPPB 382, completetomatinase, endo-1,4-beta-glycosidase4e-38159
NC_010001:4730000:4736925473692547442987374Clostridium phytofermentans ISDg, complete genomeEndo-1,4-beta-xylanase1e-37157
NC_009664:4423829:4449835444983544512321398Kineococcus radiotolerans SRS30216, complete genomeEndo-1,4-beta-xylanase8e-38157
NC_005773:5149768:5170444517044451715561113Pseudomonas syringae pv. phaseolicola 1448A, complete genomeglycosyl hydrolase, family 107e-36151
NC_007604:1442500:1451255145125514523761122Synechococcus elongatus PCC 7942, complete genomeEndo-1,4-beta-xylanase7e-36151
NC_006576:161112:1684231684231695441122Synechococcus elongatus PCC 6301, complete genomeendo-1-beta-xylanase2e-35149
NC_013730:7743954:7763330776333077644931164Spirosoma linguale DSM 74, complete genomeEndo-1,4-beta-xylanase2e-34147
NC_010581:2999002:3007211300721130095232313Beijerinckia indica subsp. indica ATCC 9039, complete genomeEndo-1,4-beta-xylanase4e-33142
NC_007005:5367454:5371848537184853729601113Pseudomonas syringae pv. syringae B728a, complete genomeEndo-1,4-beta-xylanase5e-31135
NC_010994:3477000:3478492347849234795651074Rhizobium etli CIAT 652, complete genomeendo-1,4-beta-xylanase protein (exopolysaccharide export)4e-28125
NC_014151:856354:8756448756448775271884Cellulomonas flavigena DSM 20109 chromosome, complete genomeglycoside hydrolase family 102e-26119
NC_011369:3022235:3022235302223530233081074Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeglycoside hydrolase6e-26118
NC_014318:5586287:5614314561431456159481635Amycolatopsis mediterranei U32 chromosome, complete genomeglycosyl hydrolase/beta-1,4-xylanase6e-25115
NC_013410:3685588:3687972368797236896211650Fibrobacter succinogenes subsp. succinogenes S85 chromosome,glycoside hydrolase family protein4e-23109
NC_014391:277555:2850832850832866931611Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeglycoside hydrolase family 10 protein4e-2099.4
NC_014391:277555:283411283411284016606Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeglycoside hydrolase family 10 protein3e-1996.3
NC_007912:4579873:4579873457987345834333561Saccharophagus degradans 2-40, complete genomeMethionine biosynthesis MetW8e-1478.2
NC_015966:1145974:1166222116622211677181497Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeendo-1,4-beta-xylanase3e-1273.2
NC_015177:2972701:3011287301128730134522166Pedobacter saltans DSM 12145 chromosome, complete genomeCarbohydrate-binding CenC domain protein5e-1272.4
NC_008752:3955327:396062439606243961601978Acidovorax avenae subsp. citrulli AAC00-1, complete genomeglycoside hydrolase, family 104e-1169.3
NC_015966:1145974:1154810115481011572812472Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeendo-1,4-beta-xylanase5e-1065.9
NC_013501:990022:1008824100882410101281305Rhodothermus marinus DSM 4252, complete genomeglycoside hydrolase family 108e-0961.6
NC_013410:2179342:2205140220514022070111872Fibrobacter succinogenes subsp. succinogenes S85 chromosome,carbohydrate binding family 61e-0654.7