Pre_GI: BLASTP Hits

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Query: NC_010102:931055:938012 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 938012, End: 940063, Length: 2052

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2029340:2044393204439320459551563Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage tail-like protein0748
NC_016856:2085283:2096201209620120977631563Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein0748
NC_011205:2137696:2149389214938921509511563Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein0748
NC_016810:2027311:2042364204236420439591596Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail fiber protein0747
NC_016857:2027311:2042364204236420439261563Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail protein0747
NC_017046:2026672:2041725204172520432871563Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail fiber protein0747
NC_011294:2009388:2021082202108220226441563Salmonella enterica subsp. enterica serovar Enteritidis strphage tail fiber protein0746
NC_011094:2115750:2128065212806521296091545Salmonella enterica subsp. enterica serovar Schwarzengrund strtail protein0704
NC_006905:1342474:1346171134617113488492679Salmonella enterica subsp. enterica serovar Choleraesuis strside tail fiber protein9e-142504
NC_011294:1006630:1015048101504810167571710Salmonella enterica subsp. enterica serovar Enteritidis strchimeric prophage tail protein2e-139496
NC_011205:1107998:1115675111567511173841710Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853side tail fiber protein2e-139496
NC_011080:1166951:1171987117198711735191533Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein8e-58225
NC_005815:61148:2928292858642937Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completephage lambda-related protein8e-56218
NC_003198:1867456:1890004189000418915151512Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage tail protein1e-52208
AP010958:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein8e-39162
NC_013353:604719:6088486088486117632916Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein8e-39162
NC_011415:644811:6490376490376520032967Escherichia coli SE11 chromosome, complete genomehypothetical protein8e-39162
NC_013361:649518:6543596543596573192961Escherichia coli O26:H11 str. 11368 chromosome, complete genomeside tail fiber protein7e-39162
NC_007613:1353500:1373323137332313754732151Shigella boydii Sb227, complete genomeputative bacteriophage tail protein6e-39162
NC_013941:733286:7374277374277402612835Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePPE-repeat protein7e-38159
NC_013850:3303500:330998233099823310809828Klebsiella variicola At-22 chromosome, complete genomehypothetical protein1e-1585.1
NC_009436:1141376:115126011512601151958699Enterobacter sp. 638, complete genomehypothetical protein4e-1067.4