Pre_GI: BLASTP Hits

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Query: NC_010102:2862178:2863003 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2863003, End: 2863740, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016810:2871689:289526428952642896067804Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage capsid protein3e-130464
NC_011147:4460726:446072644607264461463738Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-130462
NC_011080:2870428:288343428834342884129696Salmonella enterica subsp. enterica serovar Newport str. SL254,glycoprotein 35e-123440
NC_016857:2871689:289526428952642895959696Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glycoprotein 37e-122436
NC_006511:4465495:446549544654954466229735Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-103373
NC_009436:3367194:337950033795003380231732Enterobacter sp. 638, complete genomehypothetical protein2e-85315
NC_007613:4217557:422250342225034223237735Shigella boydii Sb227, complete genomehypothetical protein8e-80296
NC_021066:5342127:535991653599165360653738Raoultella ornithinolytica B6, complete genomehypothetical protein2e-79295
NC_010468:49074:504805048051214735Escherichia coli ATCC 8739, complete genomehypothetical protein2e-79295
NC_011740:448000:453384453384454184801Escherichia fergusonii ATCC 35469, complete genomeGlycoprotein 3 (Capsid size determination protein)3e-79295
NC_016845:575123:588482588482589219738Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-78292
NC_013361:4959323:496073749607374961471735Escherichia coli O26:H11 str. 11368 chromosome, complete genomecapsid size determining protein2e-78292
NC_010468:1130000:115162311516231152357735Escherichia coli ATCC 8739, complete genomehypothetical protein2e-78291
NC_010498:4072681:408652440865244087258735Escherichia coli SMS-3-5, complete genomeglycoprotein 3, capsid size determination protein Sid1e-77289
NC_012917:3684840:369080836908083691569762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein1e-26120
NC_012917:833721:839217839217839978762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein5e-26117
NC_013508:3593000:361063436106343610996363Edwardsiella tarda EIB202, complete genomehypothetical protein4e-21101
NC_020211:996497:100840610084061009188783Serratia marcescens WW4, complete genomeNAD-dependent aldehyde dehydrogenase3e-1272.4
NC_013508:3593000:360828536082853608596312Edwardsiella tarda EIB202, complete genomehypothetical protein1e-1067
NC_016818:1291665:130313713031371303886750Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein1e-1066.6
NC_015061:1251905:126414312641431264892750Rahnella sp. Y9602 chromosome, complete genomehypothetical protein3e-1065.9
NC_013508:3188978:324857332485733249376804Edwardsiella tarda EIB202, complete genomeputative phage capsid protein2e-0859.7
NC_014121:677799:690064690064690807744Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative phage capsid protein6e-0857.8
NC_003198:4676536:468956646895664690426861Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative phage capsid protein2e-0653.1
NC_004631:4661000:467245546724554673315861Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative phage capsid protein2e-0653.1
NC_009778:567000:597311597311598021711Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0653.1