Pre_GI: BLASTP Hits

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Query: NC_009831:5107924:5108743 Shewanella sediminis HAW-EB3, complete genome

Start: 5108743, End: 5110101, Length: 1359

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009922:2800253:2800253280025328016171365Alkaliphilus oremlandii OhILAs, complete genomesodium:neurotransmitter symporter7e-58224
NC_009633:337706:3537863537863551411356Alkaliphilus metalliredigens QYMF chromosome, complete genomesodium:neurotransmitter symporter2e-54213
NC_002570:1220180:1223435122343512247961362Bacillus halodurans C-125, complete genomesodium-dependent transporter6e-53208
NC_009922:2800253:2802038280203828034051368Alkaliphilus oremlandii OhILAs, complete genomesodium:neurotransmitter symporter6e-49195
NC_009633:365325:3805383805383819531416Alkaliphilus metalliredigens QYMF chromosome, complete genomesodium:neurotransmitter symporter9e-47187
NC_016745:3170384:3173048317304831744181371Oceanimonas sp. GK1 chromosome, complete genomesodium:neurotransmitter symporter4e-44179
NC_010519:1764261:1782919178291917842831365Haemophilus somnus 2336 chromosome, complete genomesodium:neurotransmitter symporter6e-44178
NC_009674:1707944:1726199172619917275391341Bacillus cytotoxicus NVH 391-98 chromosome, complete genomesodium:neurotransmitter symporter2e-43177
NC_012029:1654816:1657302165730216586571356Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomesodium:neurotransmitter symporter4e-42172
NC_007005:4992730:4997122499712249985581437Pseudomonas syringae pv. syringae B728a, complete genomeSodium:neurotransmitter symporter4e-41169
NC_017243:723000:7392767392767406641389Brachyspira intermedia PWS/A chromosome, complete genomeNa+-dependent transporter of the SNF family6e-41169
NC_013791:2273389:2273389227338922747681380Bacillus pseudofirmus OF4 chromosome, complete genomesodium-dependent transporter2e-40167
NC_012997:3651993:3652433365243336537821350Teredinibacter turnerae T7901, complete genometransporter, sodium-dependent family4e-40166
NC_018604:233769:2354362354362368241389Brachyspira pilosicoli WesB complete genomeSNF family sodium-dependent transporter1e-39164
NC_014330:1541874:1544194154419415455821389Brachyspira pilosicoli 95/1000 chromosome, complete genomeSNF family sodium-dependent transporter1e-39164
NC_018607:2578433:2592385259238525937731389Brachyspira pilosicoli B2904 chromosome, complete genomeSNF family sodium-dependent transporter1e-39164
NC_014150:1006000:1011044101104410124291386Brachyspira murdochii DSM 12563 chromosome, complete genomesodium:neurotransmitter symporter3e-39163
NC_015425:2690448:2694421269442126957881368Clostridium botulinum BKT015925 chromosome, complete genomesodium-dependent symporter family protein2e-38160
NC_015276:565701:5825945825945839521359Marinomonas mediterranea MMB-1 chromosome, complete genomesodium:neurotransmitter symporter2e-38160
NC_007912:3466966:3468755346875534701281374Saccharophagus degradans 2-40, complete genomesodium-dependent transporter family protein3e-38159
NC_011772:1684404:1701992170199217033291338Bacillus cereus G9842, complete genomesodium-dependent transporter2e-37156
NC_011969:1816746:1819124181912418204611338Bacillus cereus Q1 chromosome, complete genomesodium-dependent serine transporter3e-37156
NC_019964:1873167:1898183189818318995531371Halovivax ruber XH-70, complete genomeSNF family Na+-dependent transporter7e-37155
NC_016779:1688946:1691325169132516926621338Bacillus cereus F837/76 chromosome, complete genomesodium-dependent transporter8e-37155
NC_019908:1512622:1527989152798915293741386Brachyspira pilosicoli P43/6/78 chromosome, complete genomeSNF family sodium-dependent transporter3e-36153
NC_005773:4797242:4801653480165348030561404Pseudomonas syringae pv. phaseolicola 1448A, complete genomesodium-dependent transporter, putative4e-36152
NC_010674:3049500:3067062306706230685581497Clostridium botulinum B str. Eklund 17B, complete genomesodium/proline symporter2e-35150
NC_010723:2873886:2890620289062028921161497Clostridium botulinum E3 str. Alaska E43, complete genomesodium/proline symporter6e-35149
NC_016002:1938749:1958749195874919601371389Pseudogulbenkiania sp. NH8B, complete genomesodium:neurotransmitter symporter7e-35148
NC_008593:2457594:2461214246121424625961383Clostridium novyi NT, complete genomesodium-dependent symporter family protein8e-35148
NC_014256:636000:6573046573046586321329Helicobacter pylori B8 chromosome, complete genomehypothetical protein2e-34147
NC_014256:636000:6559656559656572931329Helicobacter pylori B8 chromosome, complete genomehypothetical protein8e-34145
NC_000917:1778173:1796894179689417983691476Archaeoglobus fulgidus DSM 4304, complete genomesodium- and chloride-dependent transporter7e-34145
NC_013416:668152:6721316721316736331503Aggregatibacter actinomycetemcomitans D11S-1, complete genomesodium-dependent transporter2e-33144
NC_016513:974402:9783899783899798911503Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completesodium-dependent transporter2e-33144
NC_014297:1282302:1298143129814312994981356Halalkalicoccus jeotgali B3 chromosome, complete genomesodium-dependent transporter4e-33142
NC_018524:4988810:4990137499013749917561620Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeneurotransmitter symporter family protein2e-32140
NC_015474:1432065:1456250145625014575931344Pyrococcus sp. NA2 chromosome, complete genomeputative transporter3e-31136
NC_010410:11201:2576825768272461479Acinetobacter baumannii AYE, complete genomehypothetical protein3e-31136
NC_010611:3879190:3883829388382938853071479Acinetobacter baumannii ACICU, complete genomeNa+-dependent transporter of the SNF family3e-31136
NC_007519:1782067:1816804181680418183001497Desulfovibrio alaskensis G20 chromosome, complete genomesodium/proline symporter4e-30132
NC_011027:303000:3243423243423258471506Chlorobaculum parvum NCIB 8327, complete genomesodium:neurotransmitter symporter1e-29130
NC_012778:207415:2141232141232154931371Eubacterium eligens ATCC 27750, complete genomeneurotransmitter:Na+ symporter, NSS family6e-29129
NC_014364:1116439:1117622111762211191181497Spirochaeta smaragdinae DSM 11293 chromosome, complete genomesodium:neurotransmitter symporter9e-29128
NC_012704:696374:6979556979556997241770Corynebacterium kroppenstedtii DSM 44385, complete genomemethionine and alanine importer, large subunit2e-28127
NC_019897:128610:1345261345261360311506Thermobacillus composti KWC4 chromosome, complete genomeSNF family Na+-dependent transporter1e-27124
NC_014218:1619982:1628072162807216296311560Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomesodium:neurotransmitter symporter2e-27124
NC_013921:2375900:2379966237996623815431578Thermoanaerobacter italicus Ab9 chromosome, complete genomesodium:neurotransmitter symporter3e-27123
NC_009633:587562:6067476067476082461500Alkaliphilus metalliredigens QYMF chromosome, complete genomesodium:neurotransmitter symporter4e-27122
NC_014209:2257316:2261384226138422629611578Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,sodium:neurotransmitter symporter8e-27121
NC_012225:2198987:2212549221254922138621314Brachyspira hyodysenteriae WA1, complete genomeNa+-dependent transporters of the SNF family1e-26121
NC_010831:40000:4281542815443471533Chlorobium phaeobacteroides BS1, complete genomesodium:neurotransmitter symporter7e-26118
NC_013169:805124:8070098070098086701662Kytococcus sedentarius DSM 20547, complete genomeSNF family Na+-dependent transporter1e-25117
NC_007681:848084:8491638491638506561494Methanosphaera stadtmanae DSM 3091, complete genomepredicted Na+-dependent transporter2e-25117
NC_016843:1:2756527565288961332Treponema pallidum subsp. pertenue str. Gauthier chromosome,NSS family amino acid:sodium (Na+) symporter7e-24112
NC_000919:12545:2755727557288881332Treponema pallidum subsp. pallidum str. Nichols, complete genomesodium- and chloride- dependent transporter6e-24112
NC_010741:12542:2755427554288851332Treponema pallidum subsp. pallidum SS14, complete genomesodium- and chloride- dependent transporter6e-24112
NC_016842:1:2756527565288961332Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeNSS family amino acid:sodium (Na+) symporter6e-24112
NC_016844:12545:2756227562288931332Treponema pallidum subsp. pallidum DAL-1 chromosome, completeNSS family amino acid:sodium (Na+) symporter6e-24112
NC_016848:12548:2756527565288961332Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeNSS family amino acid:sodium (Na+) symporter6e-24112
NC_017268:1:2756327563288941332Treponema pallidum subsp. pallidum str. Chicago chromosome,sodium- and chloride- dependent transporter6e-24112
NC_021508:12543:2756027560288911332Treponema pallidum subsp. pallidum SS14, complete genomeNSS family probable amino acid:sodium (Na+) symporter6e-24112
NC_017243:3141500:3144961314496131462831323Brachyspira intermedia PWS/A chromosome, complete genomeNa+-dependent transporter1e-23111
NC_013522:736339:7538737538737553511479Thermanaerovibrio acidaminovorans DSM 6589, complete genomesodium:neurotransmitter symporter4e-21102
NC_009033:295517:3019353019353035181584Staphylothermus marinus F1, complete genomesodium:neurotransmitter symporter2e-1481.3