Pre_GI: BLASTP Hits

Some Help

Query: NC_009800:3685651:3693802 Escherichia coli HS, complete genome

Start: 3693802, End: 3694917, Length: 1116

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:231000:2409422409422421651224Escherichia coli ATCC 8739, complete genomehypothetical protein0707
NC_012967:3549880:3581981358198135832041224Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein0707
NC_012947:248000:2579722579722591951224Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein0707
NC_011748:3983432:4017600401760040187451146Escherichia coli 55989, complete genomehypothetical protein0684
CU928145:3983432:4017600401760040187451146Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein0684
NC_010498:3838419:3864118386411838653411224Escherichia coli SMS-3-5, complete genomehypothetical protein8e-159560
NC_008258:3581583:3589810358981035910331224Shigella flexneri 5 str. 8401, complete genomehypothetical protein4e-152537
NC_004337:3621985:3629549362954936307721224Shigella flexneri 2a str. 301, complete genomehypothetical protein7e-152536
NC_004337:3590323:3629549362954936307721224Shigella flexneri 2a str. 301, complete genomehypothetical protein7e-152536
NC_017328:3655876:3664405366440536656281224Shigella flexneri 2002017 chromosome, complete genomehypothetical protein7e-152536
NC_011741:3709081:3716476371647637176991224Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-151534
CU928160:3709081:3716476371647637176991224Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein3e-151534
NC_016822:3946500:395575239557523956597846Shigella sonnei 53G, complete genomehypothetical protein1e-133476
NC_007384:3741708:375267637526763753521846Shigella sonnei Ss046, complete genomehypothetical protein1e-133476
NC_010473:3722571:374705937470593747841783Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein3e-132471
AC_000091:3976888:398834239883423989124783Escherichia coli W3110 DNA, complete genomehypothetical protein3e-132471
NC_000913:3624826:364931436493143650096783Escherichia coli K12, complete genomehypothetical protein3e-132471
CP002516:246767:2565802565802578021223Escherichia coli KO11, complete genome5e-130464
NC_007613:3470314:349805534980553498849795Shigella boydii Sb227, complete genomehypothetical protein4e-129461
AP010958:4313462:431970243197024320547846Escherichia coli O103:H2 str. 12009 DNA, complete genome7e-129460
CP002185:3822470:384827138482713849116846Escherichia coli W, complete genomeconserved hypothetical protein7e-129460
NC_009801:3956917:396430339643033965148846Escherichia coli E24377A, complete genomehypothetical protein7e-129460
NC_013353:4313462:431970243197024320547846Escherichia coli O103:H2 str. 12009, complete genome7e-129460
NC_011415:3887997:389763738976373898482846Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-128459
NC_004741:4132056:414370641437064144299594Shigella flexneri 2a str. 2457T, complete genome1e-78293
NC_013361:4566779:457352145735214574105585Escherichia coli O26:H11 str. 11368 chromosome, complete genome2e-77289
NC_013364:4306000:431198043119804312294315Escherichia coli O111:H- str. 11128, complete genome2e-54213
NC_013364:4306000:431246643124664312825360Escherichia coli O111:H- str. 11128, complete genome1e-46187