Pre_GI: BLASTP Hits

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Query: NC_009800:1657550:1676062 Escherichia coli HS, complete genome

Start: 1676062, End: 1677276, Length: 1215

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008786:3915000:3937759393775939390541296Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein3e-166584
NC_010995:3640913:3645577364557736467851209Cellvibrio japonicus Ueda107, complete genomeStarvation sensing protein rspA3e-166584
NC_017093:2357583:2375715237571523769681254Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme1e-159563
NC_013174:2564979:2576791257679125780201230Jonesia denitrificans DSM 20603, complete genomemandelate racemase/muconate-lactonizing protein2e-145515
NC_013956:663295:6822426822426834951254Pantoea ananatis LMG 20103 chromosome, complete genomeRspA5e-90331
NC_016612:178864:1816411816411828941254Klebsiella oxytoca KCTC 1686 chromosome, complete genomedehydratase1e-86320
NC_011959:1965158:1975415197541519766771263Thermomicrobium roseum DSM 5159, complete genomemandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme4e-86318
NC_014306:2518996:2518996251899625202491254Erwinia billingiae Eb661, complete genomeGalactonate dehydratase7e-86318
NC_013517:1038000:1039918103991810411171200Sebaldella termitidis ATCC 33386, complete genomeMandelate racemase/muconate lactonizing protein5e-75281
NC_012669:1011473:1016366101636610176671302Beutenbergia cavernae DSM 12333, complete genomeMandelate racemase/muconate lactonizing protein1e-69263
NC_019978:2532640:2540084254008425412321149Halobacteroides halobius DSM 5150, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase8e-54211
NC_009256:3056000:3075584307558430767321149Burkholderia vietnamiensis G4 chromosome 1, complete sequencegalactonate dehydratase1e-49197
NC_008010:200796:2158792158792170271149Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme-like3e-49196
NC_006510:1995916:1999092199909220002401149Geobacillus kaustophilus HTA426, complete genomegalactonate dehydratase3e-49196
NC_015061:2927707:2929186292918629303341149Rahnella sp. Y9602 chromosome, complete genomeMandelate racemase/muconate lactonizing protein9e-49194
NC_017047:2957957:2959435295943529605831149Rahnella aquatilis HX2 chromosome, complete genomegalactonate dehydratase1e-48194
NC_013037:6281164:6338780633878063399581179Dyadobacter fermentans DSM 18053, complete genomeMandelate racemase/muconate lactonizing protein1e-45184
NC_010498:1094000:1110613111061311117611149Escherichia coli SMS-3-5, complete genomemandelate racemase/muconate lactonizing enzyme family protein1e-45184
NC_003888:3817000:3835870383587038370031134Streptomyces coelicolor A3(2), complete genomeisomerase2e-45183
NC_019974:1184871:1230980123098012321311152Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase8e-44178
NC_007948:4558000:4596945459694545981051161Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme1e-41171
NC_014550:3534000:3547607354760735487551149Arthrobacter arilaitensis Re117, complete genomegalactonate dehydratase2e-40166
NC_007948:4646344:4658443465844346595701128Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme5e-40165
NC_008541:2119883:2139544213954421407311188Arthrobacter sp. FB24 chromosome 1, complete sequenceMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein9e-35148
NC_014363:8228:1919219192203371146Olsenella uli DSM 7084 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-34147
NC_012850:3454270:3455189345518934563341146Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeMandelate racemase/muconate lactonizing protein8e-34145
NC_019974:2421422:2444798244479824460361239Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase2e-33143
NC_006396:508802:5107795107795120291251Haloarcula marismortui ATCC 43049 chromosome I, complete sequencemandelate racemase/muconate lactonizing enzyme family2e-33143
NC_016745:1472000:1477793147779314789741182Oceanimonas sp. GK1 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-30134
NC_014541:643604:6616346616346627551122Ferrimonas balearica DSM 9799 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-29131
NC_008380:4078670:4081119408111940822851167Rhizobium leguminosarum bv. viciae 3841, complete genomeputative mandelate racemase/muconate lactonising family protein7e-30131
NC_014364:815346:8539138539138551031191Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeMandelate racemase/muconate lactonizing protein8e-29128
NC_003305:1297785:1319671131967113208581188Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-28127
NC_019964:1873167:1890729189072918920331305Halovivax ruber XH-70, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase6e-27122
NC_011959:1965158:1974154197415419753261173Thermomicrobium roseum DSM 5159, complete genome2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase7e-27122
NC_015151:665346:6873766873766884791104Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-26121
NC_008786:2573558:2577007257700725781161110Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein9e-27121
NC_012588:2173907:2188053218805321893121260Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-26120
NC_012623:355393:3614623614623627211260Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-26120
NC_012726:2179085:2190726219072621919851260Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-26120
NC_017276:2080102:2096193209619320974521260Sulfolobus islandicus REY15A chromosome, complete genomemandelate racemase (MR) subfamily2e-26120
NC_012589:2303096:2317250231725023185091260Sulfolobus islandicus L.S.2.15, complete genomeMandelate racemase/muconate lactonizing protein2e-26120
NC_007181:1766910:1776768177676817778861119Sulfolobus acidocaldarius DSM 639, complete genomemandelate racemase/muconate lactonizing enzyme3e-26119
NC_011887:72364:8731387313885031191Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeMandelate racemase/muconate lactonizing protein6e-26119
NC_012632:2279544:2293690229369022949491260Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein6e-26119
NC_013730:7355010:7368559736855973699831425Spirosoma linguale DSM 74, complete genomeGalactonate dehydratase1e-25117
NC_011959:1965158:1977016197701619782151200Thermomicrobium roseum DSM 5159, complete genomeprobable galactonate dehydratase protein7e-25115
NC_014298:310964:3400563400563413211266Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing protein2e-24114
NC_014297:476510:5207865207865220061221Halalkalicoccus jeotgali B3 chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-24113
NC_002689:1228061:1250055125005512512211167Thermoplasma volcanium GSS1, complete genomeGalactonate dehydratase5e-24112
NC_007963:3553678:3562167356216735633391173Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme1e-23110
NC_008380:4078670:4082349408234940837101362Rhizobium leguminosarum bv. viciae 3841, complete genomeputative mandelate racemase/muconate lactonising family protein4e-23109
NC_008786:3045770:3053931305393130551271197Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein7e-23108
NC_003888:3817000:3843523384352338446081086Streptomyces coelicolor A3(2), complete genomeracemase1e-22108
NC_010676:2720068:2731170273117027323031134Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein1e-22107
NC_014500:564864:5660205660205673661347Dickeya dadantii 3937 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein7e-22105
NC_011740:1494796:1510509151050915117171209Escherichia fergusonii ATCC 35469, complete genomeputative mandelate racemase4e-21102
NC_008380:4078670:4083728408372840849271200Rhizobium leguminosarum bv. viciae 3841, complete genomeputative madelate racemase/muconate lactonising family protein9e-21101
NC_005877:509877:5132215132215143961176Picrophilus torridus DSM 9790, complete genomegluconate/galactonate dehydratase1e-20101
NC_003911:2540453:2565441256544125666101170Silicibacter pomeroyi DSS-3, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-20100
NC_009379:435404:4563424563424574751134Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-20100
NC_007963:2777066:2782685278268527838211137Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme4e-2099.4
NC_017082:6444522:6446279644627964473701092Bradyrhizobium sp. S23321, complete genomemandelate racemase2e-1997.1
NC_015563:313283:3329173329173341041188Delftia sp. Cs1-4 chromosome, complete genomeL-rhamnonate dehydratase3e-1996.3
NC_014376:693820:7121477121477132501104Clostridium saccharolyticum WM1 chromosome, complete genomeMandelate racemase/muconate lactonizing protein4e-1892.8
NC_009664:4696961:4757316475731647584161101Kineococcus radiotolerans SRS30216, complete genomeMandelate racemase/muconate lactonizing protein5e-1892.4
NC_009440:1045882:1054839105483910559811143Metallosphaera sedula DSM 5348 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-1892
NC_013740:2218215:2231462223146222326251164Acidaminococcus fermentans DSM 20731, complete genomeMandelate racemase/muconate lactonizing protein3e-1790.1
NC_016642:1990684:2010756201075620119251170Pseudovibrio sp. FO-BEG1 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-1687.4
NC_017275:927814:9468219468219479511131Sulfolobus islandicus HVE10/4 chromosome, complete genomemandelate racemase/muconate lactonizing family protein2e-1687.4
NC_007952:3196085:3229683322968332307621080Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative mandelate racemase (MdlA)2e-1584
NC_012623:2004786:2009055200905520101731119Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-1583.6
NC_008319:787881:7904647904647914891026Synechococcus sp. CC9311, complete genomeMandelate racemase / muconate lactonizing enzyme, N-terminal domain protein4e-1582.8
NC_012632:538967:5428355428355439531119Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1582.4
NC_019974:1184871:1201337120133712024221086Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase7e-1582
NC_012588:742000:7617737617737628851113Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-1481.3
NC_007348:752692:7614247614247626141191Ralstonia eutropha JMP134 chromosome 2, complete sequenceMandelate racemase/muconate lactonizing enzyme2e-1480.5
NC_015556:4118304:4141558414155841427121155Pseudomonas fulva 12-X chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-1480.5
NC_011894:6708970:6722559672255967237431185Methylobacterium nodulans ORS 2060, complete genomeMandelate racemase/muconate lactonizing protein9e-1478.2
NC_015968:3053565:3058766305876630599201155Enterobacter asburiae LF7a chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-1377
NC_014614:260782:2744012744012755041104Clostridium sticklandii, complete genomeputative muconate cycloisomerase2e-1273.9
NC_017068:1327025:1330760133076013318511092Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative chloromuconate cycloisomerase4e-1272.8
NC_018000:1914945:1956256195625619573711116Sinorhizobium fredii USDA 257 chromosome, complete genomeL-alanine-DL-glutamate epimerase-like protein6e-1272.4
NC_004193:2921103:2926661292666129278361176Oceanobacillus iheyensis HTE831, complete genomemuconate cycloisomerase9e-1271.6
NC_016023:1658377:1660267166026716613311065Bacillus coagulans 36D1 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-1170.9
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein2e-1170.9
NC_002678:6061448:6083376608337660845601185Mesorhizobium loti MAFF303099, complete genomechloromuconate cycloisomerase2e-1067.4
NC_018643:807405:8227418227418238441104Alpha proteobacterium HIMB5 chromosome, complete genomemandelate racemase family protein,mandelate racemase family protein2e-1067
NC_007951:3631772:3651060365106036521721113Burkholderia xenovorans LB400 chromosome 1, complete sequenceChloromuconate cycloisomerase6e-1065.5
NC_010170:1580832:1582665158266515837771113Bordetella petrii, complete genomemuconate cycloisomerase I6e-1065.5
NC_003454:63500:9750597505986321128Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeO-succinylbenzoate-CoA synthase2e-0963.9
NC_012726:2143670:2154817215481721560191203Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein9e-0961.6
NC_017986:5833819:5837087583708758382201134Pseudomonas putida ND6 chromosome, complete genomeCatB5e-0859.3
NC_015733:2720183:2742169274216927434821314Pseudomonas putida S16 chromosome, complete genomemandelate racemase/muconate lactonizing protein9e-0755.1
NC_011002:564654:5676085676085687441137Burkholderia cenocepacia J2315 chromosome 3, complete sequencemuconate cycloisomerase I 22e-0654.3