Pre_GI: BLASTP Hits

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Query: NC_009708:915814:921173 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 921173, End: 921802, Length: 630

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013592:446092:463175463175463804630Dickeya dadantii Ech586, complete genomehypothetical protein8e-76283
NC_013421:1505176:151089815108981511509612Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-37154
NC_012912:1053618:107241210724121073035624Dickeya zeae Ech1591, complete genomeCP4-57 prophage; hypothetical protein3e-36151
NC_015761:299386:308796308796309416621Salmonella bongori NCTC 12419, complete genomeprophage protein1e-34145
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-34144
NC_013353:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein7e-33140
AP010958:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein7e-33140
AP010958:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-32139
NC_013353:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-32139
NC_011751:3453683:350750035075003508105606Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-32138
CP002797:2062006:208273220827322083301570Escherichia coli NA114, complete genomehypothetical protein4e-32137
NC_004431:3409389:348439734843973484966570Escherichia coli CFT073, complete genomehypothetical protein6e-32137
NC_012691:1250385:127024212702421270910669Tolumonas auensis DSM 9187, complete genomehypothetical protein6e-32137
NC_020418:116500:136581136581137168588Morganella morganii subsp. morganii KT, complete genometransposase2e-31135
NC_013716:5201097:523347852334785234047570Citrobacter rodentium ICC168, complete genomehypothetical protein3e-31134
NC_009708:915814:924077924077924703627Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein8e-31133
NC_012759:2633949:264438126443812645007627Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein2e-29129
NC_010473:2839902:285033428503342850960627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein2e-29129
AC_000091:2747520:275920327592032759829627Escherichia coli W3110 DNA, complete genomehypothetical protein2e-29129
NC_000913:2746886:275856927585692759195627Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein2e-29129
NC_020064:3609844:362956736295673630199633Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF3296)1e-28126
AC_000091:273325:291546291546292172627Escherichia coli W3110 DNA, complete genomehypothetical protein1e-27123
NC_000913:272071:291546291546292172627Escherichia coli K12, complete genomeCP4-6 prophage; conserved protein1e-27123
NC_010473:247429:267096267096267722627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; conserved protein1e-27123
NC_015379:908904:935764935764936426663Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative prophage2e-26119
NC_009092:1441813:145080814508081451473666Shewanella loihica PV-4, complete genometransposase3e-25115
CP002185:4750571:477035247703524770966615Escherichia coli W, complete genomehypothetical protein6e-25114
CP002516:4236680:424190342419034242517615Escherichia coli KO11, complete genomehypothetical protein6e-25114
NC_016902:4236680:424190342419034242517615Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-25114
NC_010634:1342393:135022813502281350812585Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein4e-25114
NC_013456:212150:228379228379229041663Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein8e-25113
NC_020181:5130513:514061751406175141201585Enterobacter aerogenes EA1509E, complete genomeFIG00947185: hypothetical protein1e-24113
NC_009832:1946401:195677919567791957375597Serratia proteamaculans 568, complete genomehypothetical protein3e-24111
NC_008321:1993541:200569020056902006352663Shewanella sp. MR-4, complete genomehypothetical protein7e-24110
NC_012691:2476223:249796124979612498647687Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-23109
NC_008577:2115440:212463021246302125307678Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-23109
NC_008322:2077628:208846620884662089143678Shewanella sp. MR-7, complete genomehypothetical protein3e-23108
NC_010322:5293652:531395953139595314558600Pseudomonas putida GB-1 chromosome, complete genometransposase1e-21103
NC_014618:690056:703227703227703925699Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-21102
NC_018691:3525430:356448435644843565281798Alcanivorax dieselolei B5 chromosome, complete genomeConserved prophage protein5e-2097.8
NC_011750:4390000:440299944029994403730732Escherichia coli IAI39 chromosome, complete genomehypothetical protein8e-2097.1
NC_011745:3405520:341584334158433416574732Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1996.3
NC_008563:4707826:471722247172224717953732Escherichia coli APEC O1, complete genomehypothetical protein1e-1996.3
NC_011083:4547825:457460345746034575334732Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1995.9
NC_004431:4319152:433086843308684331599732Escherichia coli CFT073, complete genomehypothetical protein4e-1994.4
NC_016944:514742:528313528313528957645Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-1892.4
NC_002505:514732:528305528305528949645Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-1892.4
NC_011742:3245500:326203032620303262770741Escherichia coli S88 chromosome, complete genomehypothetical protein2e-1892.4
NC_008563:3332114:334723833472383347978741Escherichia coli APEC O1, complete genomehypothetical protein2e-1892.4
CP002797:4656327:465914946591494659889741Escherichia coli NA114, complete genomehypothetical protein2e-1892
NC_008253:4817864:482665248266524827383732Escherichia coli 536, complete genomehypothetical protein6e-1890.9
NC_007946:4875997:488615448861544886885732Escherichia coli UTI89, complete genomehypothetical protein6e-1890.9
NC_011274:311843:329893329893330726834Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-1890.5
NC_015663:1869000:187942718794271879816390Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-1789
NC_018678:2382708:238932323893232390021699Alteromonas macleodii str. 'English Channel 673' chromosome,prophage6e-1477.4
NC_009901:1516340:152731215273121527938627Shewanella pealeana ATCC 700345, complete genometransposase7e-1477
NC_016445:1363831:142214014221401422433294Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-0860.1
NC_012668:1688500:169647516964751696768294Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-0860.1
NC_017328:1075535:109037810903781090674297Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-0859.3