Pre_GI: BLASTP Hits

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Query: NC_009708:915814:918013 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 918013, End: 918888, Length: 876

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:443398:460493460493461368876Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGTPase8e-122436
NC_016816:1137904:115424211542421155117876Pantoea ananatis LMG 5342, complete genomeGTPase family protein8e-122436
NC_011283:4966471:498842449884244989299876Klebsiella pneumoniae 342 chromosome, complete genomeGTPase family protein7e-121433
NC_011415:308825:321721321721322596876Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-120431
AP010958:5272863:528447952844795285354876Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-120430
NC_013353:5272863:528447952844795285354876Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-120430
NC_013716:5201097:522755352275535228464912Citrobacter rodentium ICC168, complete genomeputative GTP-binding protein1e-100366
NC_004431:1211000:122440712244071225279873Escherichia coli CFT073, complete genomeHypothetical protein yeeP2e-99362
NC_017328:3088907:312597531259753126847873Shigella flexneri 2002017 chromosome, complete genomeputative GTPase3e-99361
NC_004741:3041294:307710030771003077972873Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-99361
NC_008253:3161311:316756631675663168438873Escherichia coli 536, complete genomehypothetical protein6e-99360
NC_013361:3313284:3324187332418733252631077Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-99360
NC_008253:334467:351386351386352258873Escherichia coli 536, complete genomehypothetical protein5e-99360
NC_004431:3409389:349060834906083491480873Escherichia coli CFT073, complete genomeHypothetical protein yeeP1e-98359
NC_004337:3049118:308627030862703087142873Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-98358
NC_013592:3263005:326398732639873264862876Dickeya dadantii Ech586, complete genomeGTP-binding protein HSR1-related protein4e-98357
NC_007946:1119000:113240811324081133280873Escherichia coli UTI89, complete genomehypothetical protein5e-98357
NC_014618:4114004:412456441245644125427864Enterobacter cloacae SCF1 chromosome, complete genomeGTP-binding protein HSR1-like protein1e-88326
NC_000913:2746886:276573227657322766595864Escherichia coli K12, complete genomeCP4-57 prophage; predicted GTP-binding protein5e-84311
AC_000091:2747520:276636627663662767229864Escherichia coli W3110 DNA, complete genomepredicted GTP-binding protein5e-84311
NC_010473:2839902:285749728574972858360864Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted GTP-binding protein5e-84311
NC_012759:2633949:265154426515442652407864Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; putative GTP-binding protein5e-84311
NC_014618:690056:718630718630719493864Enterobacter cloacae SCF1 chromosome, complete genomeGTP-binding protein HSR1-like protein1e-83309
NC_012912:1053618:108081010808101081676867Dickeya zeae Ech1591, complete genomeGTP-binding protein HSR1-related2e-83308
NC_013421:1505176:150699515069951507870876Pectobacterium wasabiae WPP163, complete genomeGTP-binding protein HSR1-related protein2e-82305
NC_012917:3241196:326166632616663262541876Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeGTP-binding protein HSR1-related2e-82305
NC_013592:446092:465509465509466375867Dickeya dadantii Ech586, complete genomeGTP-binding protein HSR1-related protein3e-80298
CP002516:4236680:4243851424385142448641014Escherichia coli KO11, complete genomeGTP-binding protein HSR1-related protein7e-73273
CP002185:4750571:4768005476800547690181014Escherichia coli W, complete genomePredicted GTPase7e-73273
NC_016902:4236680:4243851424385142448641014Escherichia coli KO11FL chromosome, complete genomeGTP-binding protein HSR1-like protein7e-73273
NC_020418:116500:134409134409135272864Morganella morganii subsp. morganii KT, complete genomeputative GTP-binding protein3e-69261
NC_014121:3776902:378788937878893788773885Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePredicted GTPase1e-67256
NC_020260:882307:897892897892898776885Cronobacter sakazakii Sp291, complete genomeputative GTPase1e-67256
NC_015663:549425:566437566437567351915Enterobacter aerogenes KCTC 2190 chromosome, complete genomeHSR1-like GTP-binding protein6e-67254
NC_010634:1342393:134709313470931347980888Yersinia pseudotuberculosis PB1/+, complete genomeGTP-binding protein HSR1-related2e-64246
NC_020181:5130513:513750951375095138396888Enterobacter aerogenes EA1509E, complete genomeNgrB3e-64245
NC_004431:4319152:433443443344344335318885Escherichia coli CFT073, complete genomehypothetical protein9e-63240
NC_011750:4390000:440741744074174408301885Escherichia coli IAI39 chromosome, complete genomeputative GTPase2e-62239
NC_007946:4875997:488969248896924890576885Escherichia coli UTI89, complete genomehypothetical protein2e-62239
NC_008253:4817864:483019048301904831074885Escherichia coli 536, complete genomehypothetical protein2e-62239
NC_011745:3405520:341935134193513420235885Escherichia coli ED1a chromosome, complete genomeputative GTPase2e-62239
NC_011750:4775770:477969247796924780576885Escherichia coli IAI39 chromosome, complete genomeputative GTPase2e-62239
NC_008563:4707826:471356147135614714445885Escherichia coli APEC O1, complete genomeputative GTPase3e-62238
NC_011083:4547825:457015245701524571036885Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative GTPase7e-62237
NC_015663:1:289722897229865894Enterobacter aerogenes KCTC 2190 chromosome, complete genomeGTP-binding protein6e-56217
NC_015663:1356982:137405013740501374943894Enterobacter aerogenes KCTC 2190 chromosome, complete genomeGTP-binding protein2e-54212
NC_016612:2009927:204213720421372043027891Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGTP-binding protein3e-53209
NC_005085:1269787:127396712739671274848882Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-42173
NC_016002:2946702:296701629670162967630615Pseudogulbenkiania sp. NH8B, complete genomeHSR1-like GTP-binding protein6e-38157
CU928145:2973968:299136929913692991668300Escherichia coli 55989 chromosome, complete genomeputative GTP-binding factor (fragment) from putative CP4-like prophage9e-23107
NC_011748:2973968:299136929913692991668300Escherichia coli 55989, complete genomeputative GTP-binding factor (fragment) from putative CP4-like prophage9e-23107
NC_013525:1871795:1896507189650718978531347Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomesmall GTP-binding protein2e-0859.7
NC_014935:1287494:1304723130472313060631341Nitratifractor saLSUginis DSM 16511 chromosome, complete genometRNA modification gtpase trme4e-0858.9
NC_015732:2880801:2897998289799828994251428Spirochaeta caldaria DSM 7334 chromosome, complete genomeGTP-binding protein engA5e-0858.5
NC_002505:1931750:194971819497181950704987Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-0858.2
NC_009457:1444449:150282115028211503807987Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein7e-0858.2
NC_012582:2013515:203424020342402035226987Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein7e-0858.2
NC_012668:1688500:169680316968031697789987Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-0858.2
NC_016445:1363831:142111914211191422105987Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein7e-0858.2
NC_016944:1978058:199602619960261997012987Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-0858.2
NC_019673:8581000:8598835859883586000491215Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0756.6
NC_017270:1755552:178690317869031787889987Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein2e-0756.6
NC_008600:4101748:410174841017484102653906Bacillus thuringiensis str. Al Hakam, complete genomeGTP-binding protein2e-0756.2
NC_012472:4119192:411919241191924120097906Bacillus cereus 03BB102, complete genomeGTP-binding protein Era2e-0756.2
NC_011658:4107501:410750141075014108406906Bacillus cereus AH187 chromosome, complete genomeGTP-binding protein Era2e-0756.2
NC_011969:4001489:400258940025894003494906Bacillus cereus Q1 chromosome, complete genomeGTP-binding protein era2e-0756.2
NC_016771:4059445:406128540612854062190906Bacillus cereus NC7401, complete genomeGTP-binding protein Era2e-0756.2
NC_011999:1320159:132234113223411323243903Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein5e-0755.5
NC_008025:2211813:2216320221632022180141695Deinococcus geothermalis DSM 11300, complete genomeDynamin6e-0755.1
NC_017042:1206000:1221910122191012232471338Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completetRNA modification GTPase TrmE4e-0652.4
NC_006576:414696:4396664396664415101845Synechococcus elongatus PCC 6301, complete genomehypothetical protein7e-0651.6
NC_012004:470492:473188473188474087900Streptococcus uberis 0140J, complete genomeGTP-binding protein Era homolog7e-0651.2
NC_015714:741044:7508157508157521971383Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeGTP-binding protein8e-0651.2