Pre_GI: BLASTP Hits

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Query: NC_009708:874770:878195 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 878195, End: 879028, Length: 834

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:893921:897347897347898180834Yersinia pseudotuberculosis YPIII, complete genomeintradiol ring-cleavage dioxygenase2e-162571
NC_008150:317903:322261322261323094834Yersinia pestis Antiqua, complete genomehypothetical protein8e-162569
NC_005810:3917254:392335739233573924190834Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-162569
NC_009381:588137:591561591561592394834Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-162569
NC_014029:961522:964946964946965779834Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-162569
NC_017154:902739:907098907098907931834Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-162569
NC_017160:905783:909207909207910040834Yersinia pestis D182038 chromosome, complete genomehypothetical protein8e-162569
NC_017168:3286:9389938910222834Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-162569
NC_017265:809943:813367813367814200834Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-162569
NC_007404:1260500:126211112621111262869759Thiobacillus denitrificans ATCC 25259, complete genometwin-arginine translocation pathway signal4e-31135
NC_013960:1778411:179555217955521796292741Nitrosococcus halophilus Nc4 chromosome, complete genomeintradiol ring-cleavage dioxygenase1e-29130
NC_011757:5048714:505944850594485060377930Methylobacterium chloromethanicum CM4, complete genomeintradiol ring-cleavage dioxygenase2e-29129
NC_007484:2746078:276235027623502763120771Nitrosococcus oceani ATCC 19707, complete genomeIntradiol ring-cleavage dioxygenase5e-29128
NC_007484:1229899:123119712311971231955759Nitrosococcus oceani ATCC 19707, complete genomeProtocatechuate 3 4-dioxygenase beta subunit like protein6e-28124
NC_009925:1109770:111451511145151115315801Acaryochloris marina MBIC11017, complete genomeDioxygenase subfamily protein2e-23109
NC_011831:2213306:221801022180102218945936Chloroflexus aggregans DSM 9485, complete genomeintradiol ring-cleavage dioxygenase1e-1997.1
NC_009921:5202607:522394052239405224899960Frankia sp. EAN1pec, complete genomeintradiol ring-cleavage dioxygenase2e-1996.7
NC_014623:9552:107301073011692963Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotocatechuate 3,4-dioxygenase beta chain1e-1790.5
NC_011886:4336417:436019143601914361117927Arthrobacter chlorophenolicus A6, complete genomeintradiol ring-cleavage dioxygenase5e-1478.6
NC_018524:4988810:501285350128535013449597Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomedioxygenase family protein3e-0756.2