Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4524164 Kineococcus radiotolerans SRS30216, complete genome

Start: 4524164, End: 4524844, Length: 681

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:3029272:308224330822433082881639Salmonella enterica subsp. enterica serovar Typhimurium strputative aldolase2e-30132
NC_003197:3005842:305881330588133059451639Salmonella typhimurium LT2, complete genomehypothetical protein2e-30132
NC_016863:2974333:302730230273023027940639Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative aldolase2e-30132
NC_016857:3028421:308137430813743082012639Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74aldolase class II protein YgbL2e-30132
NC_016856:3026426:307905030790503079688639Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative aldolase2e-30132
NC_016810:3028421:308137430813743082012639Salmonella enterica subsp. enterica serovar Typhimurium strsugar aldolase2e-30132
NC_016513:317197:323507323507324139633Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative aldolase2e-29129
NC_013416:16493:211892118921821633Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative aldolase2e-29129
NC_008570:1143578:114357811435781144210633Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeAraD protein1e-28126
NC_009801:3013838:303947530394753040113639Escherichia coli E24377A, complete genomealdolase, class II, AraD/FucA family2e-28125
NC_011283:2836000:285613428561342856754621Klebsiella pneumoniae 342 chromosome, complete genomealdolase4e-28124
NC_011283:2836000:283920628392062839826621Klebsiella pneumoniae 342 chromosome, complete genomealdolase4e-28124
NC_013850:2846069:284606928460692846689621Klebsiella variicola At-22 chromosome, complete genomeclass II aldolase/adducin family protein4e-28124
NC_008800:2695977:269535726953572695980624Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative aldolase2e-27122
NC_015224:2701914:270191427019142702537624Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative aldolase2e-27122
NC_015858:1150446:115232111523211152980660Brucella pinnipedialis B2/94 chromosome chromosome 2, completeL-fuculose phosphate aldolase4e-1788.2
NC_007624:1046500:104850310485031049162660Brucella melitensis biovar Abortus 2308 chromosome II, completeClass II aldolase/adducin, N-terminal:ATP/GTP-binding site motif A (P-loop)9e-1787
NC_010740:1051000:105300510530051053664660Brucella abortus S19 chromosome 2, complete sequenceClass II aldolase/adducin, N-terminal9e-1787
NC_006933:1051873:105374810537481054407660Brucella abortus biovar 1 str. 9-941 chromosome II, completehypothetical L-fuculose phosphate aldolase9e-1787
NC_013118:1109610:111148511114851112144660Brucella microti CCM 4915 chromosome 2, complete genomeL-fuculose phosphate aldolase, putative9e-1787
NC_010167:1085106:108698110869811087640660Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein1e-1686.7
NC_010104:1096081:109795610979561098615660Brucella canis ATCC 23365 chromosome II, complete sequenceprobable L-fuculose-1-phosphate aldolase subunit P1e-1686.3
NC_004311:1096649:109852410985241099183660Brucella suis 1330 chromosome II, complete sequenceL-fuculose phosphate aldolase, putative1e-1686.3
NC_003318:183914:200223200223200957735Brucella melitensis 16M chromosome II, complete sequenceL-FUCULOSE PHOSPHATE ALDOLASE1e-1686.3
NC_014364:3500041:352412235241223524724603Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeclass II aldolase/adducin family protein2e-1582.8
NC_018644:210627:230860230860231501642Alpha proteobacterium HIMB59 chromosome, complete genomealdolase class II-like protein3e-1479
NC_017030:8766757:879242687924268793070645Corallococcus coralloides DSM 2259 chromosome, complete genomeL-fuculose phosphate aldolase2e-1375.9
NC_009053:1895485:191790619179061918556651Actinobacillus pleuropneumoniae L20, complete genomeL-fuculose phosphate aldolase5e-1374.7
NC_010939:1920781:194387119438711944521651Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeL-fuculose phosphate aldolase5e-1374.7
NC_014011:527681:531124531124531765642Aminobacterium colombiense DSM 12261 chromosome, complete genomeclass II aldolase/adducin family protein3e-1272
NC_016051:1471782:148780914878091488366558Thermococcus sp. AM4 chromosome, complete genomeribulose-5-phosphate 4-epimerase- related epimerase/aldolase6e-1270.9
NC_007498:3540945:354094535409453541607663Pelobacter carbinolicus DSM 2380, complete genomeL-fuculose-1-phosphate aldolase8e-1270.5
NC_008309:1628939:163889516388951639542648Haemophilus somnus 129PT, complete genomeL-fuculose phosphate aldolase1e-1170.1
NC_005296:5238882:524185952418595242545687Rhodopseudomonas palustris CGA009, complete genomeL-fuculose phosphate aldolase2e-1169.3
NC_019974:1184871:1222117122211712234451329Natronococcus occultus SP4, complete genomeribulose-5-phosphate 4-epimerase-like epimerase or aldolase7e-1167.4
NC_014150:2798000:280259828025982803263666Brachyspira murdochii DSM 12563 chromosome, complete genomeclass II aldolase/adducin family protein7e-1167.4
NC_011004:5520771:552374655237465524432687Rhodopseudomonas palustris TIE-1, complete genomeL-fuculose-phosphate aldolase8e-1167.4
NC_016614:1178000:119832811983281198975648Vibrio sp. EJY3 chromosome 2, complete sequenceL-fuculose phosphate aldolase2e-1066.2
NC_017243:2079018:208022820802282080932705Brachyspira intermedia PWS/A chromosome, complete genomeL-fuculose phosphate aldolase3e-1065.5
NC_013407:333387:355783355783356328546Methanocaldococcus vulcanius M7, complete genomeclass II aldolase/adducin family protein8e-1063.9
NC_014364:2562281:256749925674992568194696Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeclass II aldolase/adducin family protein8e-1063.9
NC_012881:3362955:336295533629553363608654Desulfovibrio salexigens DSM 2638, complete genomeclass II aldolase/adducin family protein1e-0963.5
NC_010003:123297:129051129051129695645Petrotoga mobilis SJ95, complete genomeclass II aldolase/adducin family protein2e-0963.2
NC_002689:1507900:152602615260261526682657Thermoplasma volcanium GSS1, complete genomeL-fuculose-phosphate aldolase2e-0962.4
NC_010001:1488000:149364214936421494436795Clostridium phytofermentans ISDg, complete genomeclass II aldolase/adducin family protein3e-0962.4
NC_014330:139175:152447152447153157711Brachyspira pilosicoli 95/1000 chromosome, complete genomeribulose-5-phosphate 4-epimerase-like epimerase/aldolase3e-0962
NC_019908:499929:504674504674505384711Brachyspira pilosicoli P43/6/78 chromosome, complete genomeribulose-5-phosphate 4-epimerase-like epimerase/aldolase3e-0962
NC_018607:1463918:148303814830381483748711Brachyspira pilosicoli B2904 chromosome, complete genomeribulose-5-phosphate 4-epimerase-like epimerase/aldolase3e-0962
NC_011766:275673:289708289708290346639Desulfurococcus kamchatkensis 1221n chromosome, complete genomeclass II aldolase/adducin family protein3e-0962
NC_015865:1468689:148915114891511489711561Thermococcus sp. 4557 chromosome, complete genomeL-fuculose phosphate aldolase2e-0859.7
NC_012225:880983:904044904044904706663Brachyspira hyodysenteriae WA1, complete genomeL-fuculose phosphate aldolase1e-0859.7
NC_009135:330628:367699367699368244546Methanococcus maripaludis C5, complete genomeclass II aldolase/adducin family protein3e-0858.5
NC_009634:547995:551311551311551856546Methanococcus vannielii SB chromosome, complete genomeclass II aldolase/adducin family protein5e-0858.2
NC_016070:167362:170623170623171183561Thermoproteus tenax Kra 1, complete genomefuculose-1-phosphate aldolase5e-0857.8
NC_015958:1516944:153105415310541531764711Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeclass II aldolase/adducin family protein7e-0857.4
NC_009637:438037:440145440145440687543Methanococcus maripaludis C7 chromosome, complete genomeclass II aldolase/adducin family protein2e-0756.2
NC_011658:2978000:298937929893792990029651Bacillus cereus AH187 chromosome, complete genomeclass II aldolase/adducin family protein2e-0756.2
NC_009654:4716417:473412347341234734779657Marinomonas sp. MWYL1, complete genomeL-fuculose-phosphate aldolase5e-0754.7
NC_009975:1374500:139144513914451392017573Methanococcus maripaludis C6, complete genomeclass II aldolase/adducin family protein6e-0754.3
NC_008343:2389710:240451224045122405192681Granulibacter bethesdensis CGDNIH1, complete genomeL-fuculose phosphate aldolase1e-0653.5
NC_009698:1337383:135510713551071355754648Clostridium botulinum A str. Hall chromosome, complete genomealdolase1e-0653.5
NC_009697:1336889:135461313546131355260648Clostridium botulinum A str. ATCC 19397 chromosome, completealdolase1e-0653.5
NC_009495:1368000:138599313859931386640648Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeAraD/FucA subfamily aldolase1e-0653.5
NC_012563:1464000:148379014837901484437648Clostridium botulinum A2 str. Kyoto, complete genomealdolase, class II, AraD/FucA subfamily2e-0652.8
NC_010516:1382000:140170414017041402351648Clostridium botulinum B1 str. Okra, complete genomealdolase, class II, AraD/FucA subfamily2e-0652.8