Pre_GI: BLASTP Hits

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Query: NC_009654:4624459:4626980 Marinomonas sp. MWYL1, complete genome

Start: 4626980, End: 4627651, Length: 672

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016642:2440070:247139724713972472071675Pseudovibrio sp. FO-BEG1 chromosome, complete genomeGntR family transcriptional regulator2e-26119
NC_008148:2231045:227183422718342272532699Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, GntR family3e-25115
NC_020829:809457:813097813097813771675Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator1e-21103
NC_014011:472650:487302487302487922621Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family2e-1892.4
NC_010170:1324758:133437413343741335066693Bordetella petrii, complete genomeprobable transcriptional regulator3e-1892
NC_008392:666000:681288681288681968681Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, GntR family5e-1891.3
NC_010501:4080937:408689040868904087633744Pseudomonas putida W619, complete genometranscriptional regulator, GntR family4e-1788.2
NC_008595:312861:330795330795331451657Mycobacterium avium 104, complete genometranscriptional regulator, GntR family protein6e-1787.4
NC_002947:4931476:493700649370064937698693Pseudomonas putida KT2440, complete genometranscriptional regulator, GntR family8e-1787
NC_017986:4374979:438945543894554390258804Pseudomonas putida ND6 chromosome, complete genomeGntR family transcriptional regulator1e-1686.7
NC_009512:1691930:170640617064061707209804Pseudomonas putida F1, complete genometranscriptional regulator, GntR family1e-1686.7
NC_002678:5060670:510937251093725110070699Mesorhizobium loti MAFF303099, complete genometranscription regulator2e-1582.8
NC_010511:7553703:755681175568117557539729Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator2e-1582.4
NC_008543:323773:326602326602327249648Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, GntR family7e-1580.9
NC_017271:4193000:422159942215994222318720Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator MdcY family3e-1479
NC_003047:3360000:337337633733763374068693Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN9e-1373.6
NC_014119:977136:993862993862994566705Burkholderia sp. CCGE1002 chromosome chromosome 3, completetranscriptional regulator, GntR family1e-1170.1
NC_015152:2887414:289483728948372895514678Spirochaeta sp. Buddy chromosome, complete genomeGntR family transcriptional regulator4e-1168.2
NC_020911:3076791:308053030805303081186657Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator1e-1067
NC_018691:2810949:281205628120562812796741Alcanivorax dieselolei B5 chromosome, complete genomeGntR family transcriptional regulator9e-1167
NC_015977:2565922:256592225659222566599678Roseburia hominis A2-183 chromosome, complete genomeGntR domain containing protein8e-1167
NC_003305:1:126631266313373711Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family1e-1066.6
NC_003063:2059311:206138320613832062171789Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-1066.2
NC_007953:314872:320623320623321315693Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, GntR family2e-1066.2
NC_016745:546249:561034561034561525492Oceanimonas sp. GK1 chromosome, complete genomeGntR family transcriptional regulator7e-1064.3
NC_011830:2177187:220439422043942205059666Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, GntR family7e-1064.3
NC_003911:1791878:184090118409011841641741Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, GntR family9e-1063.9
NC_009440:1045882:105601610560161056675660Metallosphaera sedula DSM 5348 chromosome, complete genomeGntR family transcriptional regulator2e-0962.8
NC_009142:5647737:565529756552975655986690Saccharopolyspora erythraea NRRL 2338, complete genomepossible transcriptional regulator, GntR family3e-0962
NC_009937:412302:415716415716416384669Azorhizobium caulinodans ORS 571, complete genomeGntR family transcriptional regulator3e-0962
NC_004463:1369165:139094013909401391659720Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein3e-0962
NC_015594:410454:433254433254433979726Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeGntR family transcriptional regulator5e-0961.2
NC_015458:1692401:169240116924011693138738Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator6e-0960.8
NC_007434:2449721:247662724766272477433807Burkholderia pseudomallei 1710b chromosome I, complete sequencetranscriptional regulator, gntR family1e-0860.1
NC_019940:2931500:295856629585662959279714Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator1e-0860.1
NC_013939:1625491:163812216381221638790669Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator1e-0859.7
NC_014206:2971304:298470229847022985352651Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator2e-0859.7
NC_014974:1076565:108378810837881084447660Thermus scotoductus SA-01 chromosome, complete genomeGntR family transcriptional regulator2e-0859.3
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator3e-0858.9
NC_013446:2655955:266091026609102661545636Comamonas testosteroni CNB-2, complete genometranscriptional regulator, GntR family3e-0858.9
NC_018515:937994:937994937994938674681Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator3e-0858.5
NC_004463:2262467:226446822644682265103636Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein4e-0858.2
NC_010002:3357752:335915233591523359841690Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family6e-0857.8
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR8e-0857.4
NC_014098:1258559:126150612615061262153648Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family1e-0757
NC_008686:1383891:140152714015271402195669Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, GntR family1e-0757
NC_016641:4727000:472732347273234728054732Paenibacillus terrae HPL-003 chromosome, complete genomegluconate operon transcriptional repressor9e-0857
NC_010002:3357752:337233533723353373021687Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family1e-0756.6
NC_014931:3642779:365811536581153658783669Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, GntR family1e-0756.6
NC_013592:3263005:328412532841253284826702Dickeya dadantii Ech586, complete genometranscriptional regulator, GntR family1e-0756.6
NC_016906:4123000:412848441284844129173690Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator1e-0756.6
NC_016612:178864:186603186603187319717Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGntR family transcriptional regulator1e-0756.6
NC_020291:4033000:404904640490464049720675Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, GntR family1e-0756.6
NC_015458:3390674:340150434015043402238735Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator2e-0756.2
NC_007963:3553678:356654835665483567216669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family2e-0756.2
NC_010175:3712456:372623837262383726933696Chloroflexus aurantiacus J-10-fl, complete genomeGntR domain protein2e-0756.2
NC_008209:1385094:140394714039471404594648Roseobacter denitrificans OCh 114, complete genomeGntR-family transcription regulator, putative2e-0756.2
NC_004193:2921103:293098429309842931643660Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator2e-0756.2
NC_014618:2423661:244155524415552442241687Enterobacter cloacae SCF1 chromosome, complete genomeGntR family transcriptional regulator2e-0756.2
NC_008380:4078670:408035540803554081065711Rhizobium leguminosarum bv. viciae 3841, complete genomeputative GntR family transcriptional regulator2e-0755.8
NC_013850:2846069:287440328744032875089687Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, GntR family2e-0755.8
NC_010511:1351000:135481613548161355487672Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator2e-0755.8
NC_014831:2082304:210025021002502100963714Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, GntR family2e-0755.8
NC_008254:2496622:250986125098612510598738Mesorhizobium sp. BNC1, complete genometranscriptional regulator, GntR family3e-0755.5
NC_011283:2836000:291203329120332912719687Klebsiella pneumoniae 342 chromosome, complete genomeGntR family transcriptional regulator3e-0755.5
NC_011274:1544653:157101315710131571732720Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GntR family regulatory protein3e-0755.5
NC_007974:785216:801188801188802060873Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, GntR family3e-0755.5
NC_015727:1076927:109922410992241099961738Cupriavidus necator N-1 plasmid BB1p, complete sequenceGntR family transcriptional regulator3e-0755.5
NC_009720:583060:586317586317586994678Xanthobacter autotrophicus Py2, complete genomeGntR family transcriptional regulator4e-0755.1
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator4e-0755.1
NC_014098:2971011:297882229788222979547726Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family4e-0755.1
NC_012912:844339:850632850632851399768Dickeya zeae Ech1591, complete genomeGntR domain protein4e-0755.1
NC_014217:2987450:299724129972412997927687Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, GntR family5e-0754.7
NC_018524:4564493:457843645784364579053618Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, gntR family protein7e-0754.3
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family8e-0753.9
NC_014650:2097900:211502621150262115742717Geobacillus sp. Y4.1MC1 chromosome, complete genomeGntR family transcriptional regulator7e-0753.9
NC_015554:4002952:401532540153254016101777Alteromonas sp. SN2 chromosome, complete genomeGntR family transcriptional regulator1e-0653.5
NC_012880:1091486:111621711162171116951735Dickeya dadantii Ech703, complete genomeGntR domain protein1e-0653.1
NC_014258:42262:767237672377397675Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator3e-0652.4
NC_014166:1008266:102271110227111023400690Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeGntR family transcriptional regulator3e-0652.4
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator2e-0652.4
NC_015145:3657103:367579336757933676560768Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator2e-0652.4
NC_009667:1341000:136099613609961361676681Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceGntR family transcriptional regulator2e-0652.4
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator4e-0652
NC_008314:1955793:195959419595941960286693Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator3e-0652
NC_016147:2964178:297771029777102978438729Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeGntR family transcriptional regulator3e-0652
NC_013524:392089:401901401901402647747Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genometranscriptional regulator, GntR family3e-0652
NC_014364:815346:820369820369821073705Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGntR domain protein3e-0652
NC_008596:3404832:342173434217343422429696Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein3e-0652
NC_016514:2079975:207997520799752080661687Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YdfH4e-0651.6
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family5e-0651.6
NC_019970:929666:929666929666930433768Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional regulator6e-0651.2
NC_014410:989698:989698989698990465768Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, GntR family7e-0650.8
NC_013895:1282566:128756112875611288175615Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscriptional regulator, GntR family7e-0650.8
NC_013739:2106662:212626421262642127019756Conexibacter woesei DSM 14684, complete genometranscriptional regulator, GntR family7e-0650.8
NC_004557:2607073:262244126224412623106666Clostridium tetani E88, complete genometranscriptional regulator, gntR family8e-0650.4
NC_010676:897801:899693899693900427735Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, GntR family9e-0650.4
NC_013740:2218215:222773122277312228360630Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, GntR family9e-0650.4