Pre_GI: BLASTP Hits

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Query: NC_009455:273519:300086 Dehalococcoides sp. BAV1 chromosome, complete genome

Start: 300086, End: 301930, Length: 1845

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013552:68003:8645486454887332280Dehalococcoides sp. VS, complete genomesensor histidine kinase0959
NC_007498:357484:3768073768073805263720Pelobacter carbinolicus DSM 2380, complete genometwo component sensor histidine kinase2e-33144
NC_007356:51080:5966159661613281668Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase4e-29130
NC_019977:302454:3024543024543055283075Methanomethylovorans hollandica DSM 15978, complete genomePAS domain S-box4e-23110
NC_007356:1221500:1230682123068212322951614Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase1e-22108
NC_015856:2146713:2150921215092121538752955Collimonas fungivorans Ter331 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase1e-21105
NC_002936:149100:1659641659641674751512Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase9e-22105
NC_014314:238043:2791912791912807111521Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completePAS/PAC sensor signal transduction histidine kinase2e-21104
NC_013552:68003:8478484784858751092Dehalococcoides sp. VS, complete genomesensor histidine kinase7e-21102
NC_007626:4038054:4054259405425940565832325Magnetospirillum magneticum AMB-1, complete genomeSignal transduction histidine kinase3e-20100
NC_013552:1187299:1209090120909012106221533Dehalococcoides sp. VS, complete genomesensor histidine kinase3e-1997.4
NC_007356:202131:2109502109502127731824Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase1e-1895.5
NC_015138:2110149:213181221318122132792981Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completediguanylate cyclase with PAS/PAC sensor4e-1893.6
NC_015572:65597:6559765597697574161Methylomonas methanica MC09 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase6e-1893.2
NC_011146:3376816:3393758339375833975973840Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase8e-1892.8
NC_008609:1976403:2056927205692720599112985Pelobacter propionicus DSM 2379, complete genomemulti-sensor hybrid histidine kinase1e-1791.7
NC_013173:1609123:1609123160912316123623240Desulfomicrobium baculatum DSM 4028, complete genomePAS/PAC sensor hybrid histidine kinase1e-1585.1
NC_013959:826868:8672508672508700332784Sideroxydans lithotrophicus ES-1 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)1e-1585.1
NC_013890:808791:8152388152388190263789Dehalococcoides sp. GT chromosome, complete genomePAS/PAC sensor hybrid histidine kinase4e-1583.6
NC_007356:1165760:1179150117915011804661317Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase9e-1582.4
NC_009850:628024:6343516343516373322982Arcobacter butzleri RM4018, complete genometwo-component sensor histidine kinase1e-1482
NC_009464:1804791:1822845182284518244011557Uncultured methanogenic archaeon RC-I, complete genomepredicted signal transduction histidine kinase1e-1379
NC_012918:1660477:1683690168369016861222433Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase8e-1375.9
NC_002936:285527:3021023021023037061605Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase8e-1375.9
NC_011060:1898224:1926795192679519293442550Pelodictyon phaeoclathratiforme BU-1, complete genomePAS/PAC sensor signal transduction histidine kinase2e-1274.7
NC_013216:1748241:1761679176167917647443066Desulfotomaculum acetoxidans DSM 771, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)3e-1273.9
NC_020387:1257163:1277131127713112783001170Dehalococcoides mccartyi BTF08, complete genomePAS domain signal transduction histidine kinase3e-1273.9
NC_013744:300000:3029693029693056202652Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completePAS/PAC sensor signal transduction histidine kinase5e-1273.2
NC_013552:1187299:1228924122892412322803357Dehalococcoides sp. VS, complete genomesensor histidine kinase/response regulator6e-1273.2
NC_013552:1240073:1253297125329712545771281Dehalococcoides sp. VS, complete genomesensor histidine kinase9e-1272.4
NC_007356:202131:2065942065942078741281Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase2e-1171.6
NC_012796:4693500:4693542469354246964812940Desulfovibrio magneticus RS-1, complete genomesensor histidine kinase2e-1171.2
NC_009675:3067567:3087792308779230907312940Anaeromyxobacter sp. Fw109-5 chromosome, complete genomemulti-sensor signal transduction histidine kinase3e-1170.9
NC_009455:273519:302601302601302891291Dehalococcoides sp. BAV1 chromosome, complete genome3e-1170.9
NC_007356:51080:6508865088665931506Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase4e-1170.5
NC_009633:2137999:2153158215315821554792322Alkaliphilus metalliredigens QYMF chromosome, complete genomePAS/PAC sensor hybrid histidine kinase3e-1170.5
NC_002936:285527:2884842884842897641281Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase5e-1170.1
NC_018012:1076839:1097004109700411013204317Thiocystis violascens DSM 198 chromosome, complete genomePAS domain-containing protein6e-1169.7
NC_007356:1165760:1184972118497211862701299Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase6e-1169.7
NC_002936:285527:2926402926402939171278Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase8e-1169.3
NC_009483:1779601:1802418180241818049162499Geobacter uraniireducens Rf4 chromosome, complete genomemulti-sensor signal transduction histidine kinase3e-1067.4
NC_003901:1268995:1285023128502312875182496Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase5e-1066.6
NC_013501:1140390:1161733116173311648223090Rhodothermus marinus DSM 4252, complete genomemulti-sensor signal transduction histidine kinase7e-1066.2
NC_007356:51080:7601376013772391227Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase9e-1065.9
NC_014355:3248386:3248386324838632515623177Candidatus Nitrospira defluvii, complete genomeputative histidine kinase1e-0965.5
NC_009253:389835:4114594114594136992241Desulfotomaculum reducens MI-1 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase1e-0965.5
NC_015574:1474967:1492207149220714946212415Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase1e-0965.1
NC_003552:1492500:1513317151331715176874371Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase2e-0965.1
NC_019977:1245894:1251178125117812536942517Methanomethylovorans hollandica DSM 15978, complete genomePAS domain S-box2e-0964.7
NC_011146:482440:5050885050885079552868Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase4e-0963.9
NC_007484:3358000:3369303336930333715672265Nitrosococcus oceani ATCC 19707, complete genomePAS sensor, serine phosphatase RsbU regulator of sigma subunit4e-0963.5
NC_014733:1223359:1254227125422712568362610Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)4e-0963.5
NC_011146:2916223:2936286293628629387752490Geobacter bemidjiensis Bem, complete genomemulti-sensor signal transduction histidine kinase4e-0963.5
NC_012030:400515:4137984137984163742577Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completePAS/PAC sensor signal transduction histidine kinase9e-0962.4
NC_002939:2617037:2634831263483126378783048Geobacter sulfurreducens PCA, complete genomesensory box histidine kinase/response regulator1e-0862
NC_013552:68003:99210992101024223213Dehalococcoides sp. VS, complete genomehistidine kinase CheY-like domain protein2e-0861.6
NC_014253:431942:4453354453354474642130Methanohalobium evestigatum Z-7303 chromosome, complete genomesignal transduction histidine kinase3e-0860.8
NC_009051:1118486:1119615111961511207511137Methanoculleus marisnigri JR1, complete genomeputative PAS/PAC sensor protein3e-0860.5
NC_009455:273519:2847022847022879143213Dehalococcoides sp. BAV1 chromosome, complete genomehistidine kinase8e-0859.3
NC_013552:68003:7545175451787053255Dehalococcoides sp. VS, complete genomehistidine kinase8e-0859.3
NC_010506:5155951:5177746517774651792451500Shewanella woodyi ATCC 51908, complete genomemethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor9e-0859.3
NC_007517:1107408:1119656111965611214701815Geobacter metallireducens GS-15, complete genomemulti-sensor signal transduction histidine kinase1e-0758.5
NC_007645:3712272:3726842372684237291782337Hahella chejuensis KCTC 2396, complete genomeSignal transduction histidine kinase1e-0758.5
NC_011146:3720658:3720658372065837234022745Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor hybrid histidine kinase2e-0758.2
NC_011060:330437:3450903450903464541365Pelodictyon phaeoclathratiforme BU-1, complete genomeputative PAS/PAC sensor protein2e-0758.2
NC_013665:1591081:1632028163202816338571830Methanocella paludicola SANAE, complete genomeputative histidine kinase2e-0758.2
NC_014315:3207684:3219592321959232218682277Nitrosococcus watsoni C-113 chromosome, complete genomeputative PAS/PAC sensor protein2e-0757.8
NC_009455:173374:1755671755671773601794Dehalococcoides sp. BAV1 chromosome, complete genomehistidine kinase3e-0757.4
NC_002936:149100:1707701707701725601791Dehalococcoides ethenogenes 195, complete genomesensor histidine kinase3e-0757.4
NC_014654:221707:2395522395522410001449Halanaerobium sp. 'sapolanicus' chromosome, complete genomediguanylate cyclase and metal dependent phosphohydrolase3e-0757.4
NC_014314:1485500:1504752150475215065751824Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completemulti-sensor signal transduction histidine kinase4e-0757
NC_014394:2228470:2238632223863222426634032Gallionella capsiferriformans ES-2 chromosome, complete genomemulti-sensor signal transduction histidine kinase4e-0757
NC_007604:1383192:1388109138810913908982790Synechococcus elongatus PCC 7942, complete genomeTwo-component response regulator7e-0756.2
NC_006576:217697:2299022299022326912790Synechococcus elongatus PCC 6301, complete genometwo-component response regulator7e-0756.2
NC_008312:3728329:3728329372832937319523624Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase9e-0755.8
NC_014394:2111985:2128742212874221310242283Gallionella capsiferriformans ES-2 chromosome, complete genomemulti-sensor signal transduction histidine kinase1e-0655.1
NC_008255:3285561:3290740329074032931992460Cytophaga hutchinsonii ATCC 33406, complete genometwo-component sensor histidine kinase, sensor for arcA2e-0654.7
NC_002936:1395432:1406081140608114071151035Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase2e-0654.7
NC_013526:316075:3363983363983404894092Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomePAS/PAC sensor hybrid histidine kinase2e-0654.7
NC_008576:3331825:3347310334731033503032994Magnetococcus sp. MC-1, complete genomemulti-sensor hybrid histidine kinase3e-0654.3
NC_007908:4069150:4071832407183240737901959Rhodoferax ferrireducens T118, complete genomediguanylate cyclase with PAS/PAC sensor3e-0654.3
NC_003552:1157294:1157294115729411597862493Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase4e-0653.5
NC_011894:6259649:6272210627221062742312022Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase5e-0653.5
NC_007355:2426000:2426018242601824297643747Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesignal-transducing histidine kinase6e-0653.1
NC_009699:1352211:1366099136609913673581260Clostridium botulinum F str. Langeland chromosome, complete genomesensory box-containing diguanylate cyclase6e-0653.1
NC_017297:1352506:1366393136639313676521260Clostridium botulinum F str. 230613 chromosome, complete genomeputative sensory box-containing diguanylate cyclase6e-0653.1
NC_014253:933261:9412849412849429961713Methanohalobium evestigatum Z-7303 chromosome, complete genomesignal transduction histidine kinase7e-0652.8
NC_014657:473479:4836754836754856812007Caldicellulosiruptor owensensis OL chromosome, complete genome8e-0652.8
NC_015320:160792:1662711662711683372067Archaeoglobus veneficus SNP6 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase8e-0652.8
NC_015638:3113253:3120131312013131259295799Lacinutrix sp. 5H-3-7-4 chromosome, complete genometranscriptional regulator, NifA subfamily, Fis Family1e-0552.4
NC_013665:1591081:1628977162897716319012925Methanocella paludicola SANAE, complete genomeputative histidine kinase1e-0552.4